Gene Psyr_1151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1151 
Symbol 
ID3366645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1303150 
End bp1303941 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content58% 
IMG OID637651492 
Productprephenate dehydratase 
Protein accessionYP_234243 
Protein GI66044402 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATC TTAAATACAG CGCACTGACC GCCTTGTTGC TGGGCATCAC AGGCATGGCT 
CAGGCTCAGG ACTACACCTC GCATCTGGAC AAGGTGCTGC AGGCCGGCCA GCTGGCTGTG
TGCACCACTG GCGACTACAA GCCCTACTCC CTGCTGCGCG AAGACGGCGA ATACGAAGGC
ATTGATATCA CCATGGCCCG TTCACTGGCC AAGAGCCTGG GGGTGAACGT GCAGTGGGTG
CCCACGACGT GGAAAAACCT GATGCCGGAC ATGGTGGCCG GTAAATGCGA CATCGGTATG
GGTGGCATCT CGGTGAGCCT GGAACGCCAG AAAAAAGCGT TTTTCAGCAA CACGCTGGAC
GTCGATGGCA AAATCCCGCT GGTCCGCTGC GCCGATCAGG CCCTGTATCA GACTGTCGAG
CAGATCAACC AGCCCTCTGT GCGTTTGATC GAACCTGCCG GTGGCACCAA TGAAGCCTTC
GCTCGCGCTC ATCTGCCAAA GGCGTCGCTG GCCTTTCATG ACAACAAGAC CATCTTTCAG
GAGCTGCTGG ACAAGAAAGC TGACGTGATG ATCACCGATG CTTCCGAAGC GCTCTACCAG
CAGAAACGCA TGCCGGGCCT GTGTGCCGTC AACCCGACCC GCTACATGCA ATACGGCGAA
AAAGCCTATT TGTTGCCACG CGACGATGTC GCCTGGAAAG CCTATGTGGA TCAGTGGCTG
CACCTGAGCA AGGCCACTGG CGAGTATCAG CAGGCGCTGA GCGAGTGGCT GGCAGTACCC
GCCACCCCTT GA
 
Protein sequence
MMNLKYSALT ALLLGITGMA QAQDYTSHLD KVLQAGQLAV CTTGDYKPYS LLREDGEYEG 
IDITMARSLA KSLGVNVQWV PTTWKNLMPD MVAGKCDIGM GGISVSLERQ KKAFFSNTLD
VDGKIPLVRC ADQALYQTVE QINQPSVRLI EPAGGTNEAF ARAHLPKASL AFHDNKTIFQ
ELLDKKADVM ITDASEALYQ QKRMPGLCAV NPTRYMQYGE KAYLLPRDDV AWKAYVDQWL
HLSKATGEYQ QALSEWLAVP ATP