Gene Psyr_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1144 
Symbol 
ID3366638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1295950 
End bp1296282 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content52% 
IMG OID637651485 
Productcytochrome C oxidase subunit IV 
Protein accessionYP_234236 
Protein GI66044395 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.534452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.772509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAATT CGCATCACTC CGCTGAAGAC AATAGTCACG GCTCAGTGAA GTCGTACGTC 
ATCGGTTTCG TACTGTCGAT CATCCTGACT GCCATTCCGT TTGCCCTGGT GATGTCACCT
TCACTGCCGA AGGACATGAC GATCGCAATC GTTCTGGTCT TCGCGATCAT CCAGATTCTG
GTGCACCTGC ATTACTTCCT GCATCTGGAC TTCACGAGCG TGCAGCGTAA CAACGTGATG
GCCTTCGCCT TTACCACGAT GGTTATCGTC CTGCTGGTCG GCTTGTCGCT GTGGATCATT
TTCAGCGTCC ACCGCGAAAT GATGGCGCAT TGA
 
Protein sequence
MSNSHHSAED NSHGSVKSYV IGFVLSIILT AIPFALVMSP SLPKDMTIAI VLVFAIIQIL 
VHLHYFLHLD FTSVQRNNVM AFAFTTMVIV LLVGLSLWII FSVHREMMAH