| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1139 |
|---|
| Symbol | |
|---|
| ID | 3366633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1289881 |
|---|
| End bp | 1290777 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637651480 |
|---|
| Product | response regulator receiver:CheW-like protein |
|---|
| Protein accession | YP_234231 |
|---|
| Protein GI | 66044390 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.455632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA ACGTCCGAGC AGATTCACTT TCGCTGCTCC TCTTCACGTT GCGCAGCGGC
AAGCTGATGG CGATCAACCT GCTCAAGGTC AGCGAGATCA TTCCCTGCCC GCCTCTGACC
CATCTTCCCG AATCGCACCC ACACGTCAAA GGTATTGCGA CGCTACGTGG CTCGTCACTG
TCGGTTATCG ATCTGAGTCG TGCGATCGGC GAGCGTCCGC TGGCCGATCC CGACGGTGGC
TGCCTGATCG TCACGGATGT CAGCCGCTCG AAACAGGGCC TGCACGTTCA GGCCGTCAGC
AAGATTGTGC ATTGCCTGAC CACCGACATC CGCCCACCGC CCTACGGGTC GAGCAGCAAG
TCGTTCATCA CCGGGGTTAC TCAGGTCGAC GGCGTGCTGG TGCAAGTACT GGACATCGAA
AAAGTGATCC ACGGCATCGC CCCTGCACAG ATCGTCGTAC AGTCAACGGA GCTGGCCAAA
GAGGATGCGG AACTGCTGAG CAAGGCGCGG ATTCTGGTCG TCGATGACAG TCAGGTTGCC
CTGCAGCAGT CGATCATTAC CTTGCGCAAT CTCGGCCTCG AATGCCACAC GGCGCGCAGT
GCCAAAGAGG CTATCGACGT TCTGCTCGAC CTGCAGGGTA CTGCGCGACA GATCAACGTG
GTGGTGTCCG ATATCGAGAT GTCGGAGATG GACGGCTATG CCCTCACCCG CACGCTCCGG
GATACGCCGG ACTTCAGTGA TCTGTACATT CTGCTGCACA CCTCGCTCGA CAGCGCGATG
AACAGCGAGA AGTCACAGAT CGCCGGGGCC AATGCCGTGT TGACCAAGTT CTCGTCACCC
GAGTTGACCA AATGCCTGAT CGAGGCCGCA CGTACGGTAG TCGCCCAAGG GCTCTGA
|
|---|
| Protein sequence | MSKNVRADSL SLLLFTLRSG KLMAINLLKV SEIIPCPPLT HLPESHPHVK GIATLRGSSL
SVIDLSRAIG ERPLADPDGG CLIVTDVSRS KQGLHVQAVS KIVHCLTTDI RPPPYGSSSK
SFITGVTQVD GVLVQVLDIE KVIHGIAPAQ IVVQSTELAK EDAELLSKAR ILVVDDSQVA
LQQSIITLRN LGLECHTARS AKEAIDVLLD LQGTARQINV VVSDIEMSEM DGYALTRTLR
DTPDFSDLYI LLHTSLDSAM NSEKSQIAGA NAVLTKFSSP ELTKCLIEAA RTVVAQGL
|
|---|
| |