| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1134 |
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| Symbol | |
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| ID | 3366628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1286361 |
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| End bp | 1287146 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637651475 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_234226 |
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| Protein GI | 66044385 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.950799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.162532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTT TCGCTGGCTC ATGCAAGGCG CTGTTGACGG CTGTGCTGTT GACGAGCGGC
CTGGCGGCGC ACGGGGCTGT TTCGCTGAGC GGAACGCGGC TAATTTTCGA CGGGCAGTAT
CGCGAGGTCA CGCTCGAGGT GCGCAATCGC GGCAAGTCCG AGGCACTTTT ACAGGCTTGG
CTCAGTGACG CAGCGGATGA CGACGACGCC CCGGGTGAGC TTCGCAAGGC GCTGCCATTC
GTGGTCACGC CACCGCTTTC ACGCTTGGCG GTGGGCGGCA GGCAGGCCTT GCGCGTGCTC
TATCAGGGCA CAGGCATGCC GCAGAAACAC GAGTCGCTGC TGCACCTGTA TGTGCTTGAG
ATACCCCGAC GCCAGGACGG TGCGGGGCAG TTGAACATCG CCGTGCGCCA ACGCATCAAC
GTGTTCTACC GGCCCCCCGG CCTTGACGGT GATCCGGCCG ACACTCCCGC GCGGCTGCTG
TGGACACTGA CTCATGACCC GTCTCACGCC TTGTTGCTGA CGGTCAGTAA CCCGACGCCC
TATCACGCTG CCCTGCAAGC GCTGCGTATC GACGGGGTGC AGCTTGGCGA TCATCTGTTG
CTGGCGCCGG GCGCACAGGT CGCGATGGTT GTGCCGGCGA GTGTCGAGCG CTCTGCCACA
CATCGTTTTT CCTACCAGGC GCTGACCGAC TACGGCGGCC GACGGACCCA TTGCGCACAG
CTCACCGGGC AGACGGCCAC TACCGCCAGG CTGCCGAAAA ACAATTCCAT TCAGGACGAA
TGCTGA
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| Protein sequence | MSAFAGSCKA LLTAVLLTSG LAAHGAVSLS GTRLIFDGQY REVTLEVRNR GKSEALLQAW
LSDAADDDDA PGELRKALPF VVTPPLSRLA VGGRQALRVL YQGTGMPQKH ESLLHLYVLE
IPRRQDGAGQ LNIAVRQRIN VFYRPPGLDG DPADTPARLL WTLTHDPSHA LLLTVSNPTP
YHAALQALRI DGVQLGDHLL LAPGAQVAMV VPASVERSAT HRFSYQALTD YGGRRTHCAQ
LTGQTATTAR LPKNNSIQDE C
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