Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1121 |
Symbol | |
ID | 3366615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1270698 |
End bp | 1271411 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637651462 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_234213 |
Protein GI | 66044372 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.855778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAT GTGACCTCAA GCTGCCAGCA GGGCTGGTAG CACACGATTT CGACACGGCG CAGCAACTGG CCGATGCACT GGCCGAAAAG GTCGCCGAGC GCCTGAAGCA GGCGATCAGC GAGAACGGTC TGGCGACGCT GGTGGTGTCC GGTGGACGCA GCCCGGTCGC CTTCTTCCAG AGTCTGGCGA CACAACCGCT GGAGTGGTCG AAGGTCGTCA TCAGTCTGGC GGACGAGCGC TTCGTGCCGA CCGAACATGC CGACAGCAAT GCCGGCCTGC TGCAGCGCCA CTTGCTGCAG GGGCCTGTGG CGAAGGCCAG GTTTCTCGGC CTGTACAGCG TTGCGAGCAG TGTCGAGGAA GCCGCGCAGG CTGCCGATCA GGCCTTGGCC GAGCTGCCAC CCATAGATGT ACTGATTCTG GGCATGGGCG ACGACGGGCA TACCGCATCG CTATTCCCCA ACAGCCCGAA TCTGAGCGAA GCCCTTGATC TGCAAGGCGA GCGCCGCTGC CTGCCCATGC TCGCACCGAG CGTGCCGCAC CAGCGCCTGA CCCTGACCCG CCGCCTGCTG GCGTCGGCGC GCTCACCGAT TCTGTCGGTG TCCGGTCAGG CCAAGCTCGA CACCCTGCGC GCCGCGCTGG CAGGCGATGA CCTCGCCGAA ATGCCGGTGC GTGCCTTTCT CAACCCGTCT CTCGAGATTT ACTGGTGCCC ATAA
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Protein sequence | MATCDLKLPA GLVAHDFDTA QQLADALAEK VAERLKQAIS ENGLATLVVS GGRSPVAFFQ SLATQPLEWS KVVISLADER FVPTEHADSN AGLLQRHLLQ GPVAKARFLG LYSVASSVEE AAQAADQALA ELPPIDVLIL GMGDDGHTAS LFPNSPNLSE ALDLQGERRC LPMLAPSVPH QRLTLTRRLL ASARSPILSV SGQAKLDTLR AALAGDDLAE MPVRAFLNPS LEIYWCP
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