Gene Psyr_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1121 
Symbol 
ID3366615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1270698 
End bp1271411 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content65% 
IMG OID637651462 
Product6-phosphogluconolactonase 
Protein accessionYP_234213 
Protein GI66044372 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.855778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAT GTGACCTCAA GCTGCCAGCA GGGCTGGTAG CACACGATTT CGACACGGCG 
CAGCAACTGG CCGATGCACT GGCCGAAAAG GTCGCCGAGC GCCTGAAGCA GGCGATCAGC
GAGAACGGTC TGGCGACGCT GGTGGTGTCC GGTGGACGCA GCCCGGTCGC CTTCTTCCAG
AGTCTGGCGA CACAACCGCT GGAGTGGTCG AAGGTCGTCA TCAGTCTGGC GGACGAGCGC
TTCGTGCCGA CCGAACATGC CGACAGCAAT GCCGGCCTGC TGCAGCGCCA CTTGCTGCAG
GGGCCTGTGG CGAAGGCCAG GTTTCTCGGC CTGTACAGCG TTGCGAGCAG TGTCGAGGAA
GCCGCGCAGG CTGCCGATCA GGCCTTGGCC GAGCTGCCAC CCATAGATGT ACTGATTCTG
GGCATGGGCG ACGACGGGCA TACCGCATCG CTATTCCCCA ACAGCCCGAA TCTGAGCGAA
GCCCTTGATC TGCAAGGCGA GCGCCGCTGC CTGCCCATGC TCGCACCGAG CGTGCCGCAC
CAGCGCCTGA CCCTGACCCG CCGCCTGCTG GCGTCGGCGC GCTCACCGAT TCTGTCGGTG
TCCGGTCAGG CCAAGCTCGA CACCCTGCGC GCCGCGCTGG CAGGCGATGA CCTCGCCGAA
ATGCCGGTGC GTGCCTTTCT CAACCCGTCT CTCGAGATTT ACTGGTGCCC ATAA
 
Protein sequence
MATCDLKLPA GLVAHDFDTA QQLADALAEK VAERLKQAIS ENGLATLVVS GGRSPVAFFQ 
SLATQPLEWS KVVISLADER FVPTEHADSN AGLLQRHLLQ GPVAKARFLG LYSVASSVEE
AAQAADQALA ELPPIDVLIL GMGDDGHTAS LFPNSPNLSE ALDLQGERRC LPMLAPSVPH
QRLTLTRRLL ASARSPILSV SGQAKLDTLR AALAGDDLAE MPVRAFLNPS LEIYWCP