| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1096 |
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| Symbol | |
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| ID | 3366590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1238600 |
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| End bp | 1241464 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637651437 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_234188 |
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| Protein GI | 66044347 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC GTATCGAACT GACCACTGCC AACGAATTCA TTGCCCGTCA CATTGGCCCG
CGCGCGGCTG ACGAGCTGGC CATGCTGCAA ACACTGGGTT TCGATTCCAT CGAAGCGCTG
AGCGAAAGCG TTATCCCGGA AAGCATCAAG GGCACCAGCG TTCTGAACCT GCCTGCCGGG
CAGAGCGAAG CCGATGCGCT GGCGTCCATC AAGGCCATCG CCAGCAAGAA CCAGCTGTTC
AAGACCTACA TCGGCCAGGG TTACTACAAC ACCCACACAC CAGCACCGAT CCTGCGCAAC
CTGCTGGAAA ACCCGGCCTG GTACACCGCT TACACGCCTT ACCAGCCAGA GATTTCCCAG
GGCCGCCTGG AGTCACTGCT CAATTTCCAG ACACTGATCA GCGACCTCAC CGGCCTGCCG
ATTGCCAACG CCTCTCTGCT CGACGAAGCC ACCGCCGCCG CCGAGGCAAT GACCTTTTGC
AAACGCTTGA GCAAAAACAA GGCCAGCCAG CAGTTTTTCG CGTCCAGCCA CTGCCACCCG
CAAACTCTGG ATGTGTTGCG TACTCGCGCC GAGCCGTTGG GCATTACCGT GGTCGTGGCC
GATGAGCACG AGCTGGGCGA TGTCAGCGAT TACTTCGGCG CGCTGCTGCA ATATCCGGCC
AGCAATGGCG ACGTGTTCGA TTACCGCGAA CTGGTCGAAC GCTTCCACGC GGCCAACGCA
CTGGTTGCAG TGGCTGCCGA CCTGCTGGCC CTCACCCTGC TGACCCCGCC AGGCGAATTC
GGCGCTGACG TAGCGATTGG TAGCGCGCAA CGCTTCGGTG TGCCACTGGG CTTCGGTGGC
CCGCATGCGG CCTACTTCTC GACCCGCGAC GCGTTCAAGC GTGACATGCC GGGCCGTCTG
GTCGGCGTGT CGGTAGACCG TCACGGCAAG CAGGCCCTGC GCCTGGCCAT GCAGACCCGC
GAACAGCATA TTCGTCGCGA AAAGGCCACC AGCAACATCT GCACCGCACA GGTGCTACTG
GCCAACATCG CCAGCATGTA CGCCGTCTAC CATGGTCCGC GCGGCCTGAC ACAGATCGCC
AATCGTGTTC ACCAGCTGAC CGCGATTCTT GCCGAAGGCC TGAGCACGCT GGGCCTGAAC
GCCGAGCAGG CATTTTTCTT CGACAGCCTG ACACTGCACA CCGGCGACAG AACCGCTGCA
CTGCATGCCG CCGCACGCGC CAGGCACATC AACCTGCGCG AAATCGATGA CCAGCGTCTG
GGTCTGTCAC TGGACGAGAC CACCTCGCAG TCGGCCGTCG AAACGCTGTG GGCAATCTTT
GCCAACGACG GCCAGAGCCT GCCGGACTTC GCCGCGCTGG CAGACAGCGT GCAGTCGCGC
CTGCCGGCCG GGCTGTTGCG TCAGTCAGCG ATCCTCAGTC ACCCGGTGTT CAACCGCTAT
CACTCGGAAA CCGAGCTGAT GCGCTACCTG CGCAAGCTGG CCGACAAGGA CCTGGCGCTG
GATCGCACCA TGATTCCGCT GGGCTCGTGC ACCATGAAGC TCAACGCCGC CAGCGAAATG
ATCCCGGTGA CCTGGGCCGA GTTCGGCAAC CTGCACCCGT TTGCCCCGGC CGAGCAAAGC
GCCGGTTACC AGCAACTGAC CGATGAGCTG GAGGCCATGC TCTGTGCGGC CACCGGTTAC
GACGCGATCT CGCTGCAACC GAACGCCGGC TCGCAGGGCG AATACGCCGG ATTGCTGGCT
ATCCGCGCCT ATCACCAGAG CCGTGGCGAC GAACATCGCG ACATCTGCCT GATCCCTTCC
TCGGCGCACG GTACCAACCC GGCGACTGCC AACATGGCCG GTATGCGCGT CGTGGTGACC
GCCTGCGATG CACGCGGCAA CGTCGACATC GAAGACCTGC GCGCCAAGGC CGTTCAGCAT
CGCGACCAGC TTGCGGCGAT CATGATCACC TACCCGTCGA CCCACGGCGT GTTCGAAGAA
GGCATTCGCG AAATCTGCGG CATCGTTCAT GACAACGGTG GCCAGGTCTA TATCGATGGC
GCAAACATGA ACGCCATGGT TGGCCTGTGC GCACCGGGCA AGTTCGGCGG CGACGTATCG
CACCTCAACC TGCACAAGAC TTTCTGCATC CCCCACGGCG GTGGCGGCCC GGGCGTTGGC
CCGATCGGCG TGAAATCCCA TCTCGCCCCG TTCATGCCCG GTCATGCCCG CATGGAGCGC
AAGGAAGGCG CGGTCTGCGC GGCACCGTTC GGCAGCGCCA GCATTCTGCC CATTACCTGG
ATGTACATCC GCATGATGGG CGGTGAAGGC CTCAAGCGCG CTTCGCAACT GGCGATTCTC
AACGCCAACT ACATCTCGCG CCGTCTGGAG GAGCATTACC CGGTGCTCTA CACCGGCAGC
AACGGCCTGG TCGCGCACGA GTGCATTCTC GACCTGCGCC CGATCAAGGA CAGCAGCGGC
ATCAGCGTCG ACGACGTGGC CAAGCGCCTG ATCGACTTCG GCTTCCATGC CCCGACCATG
TCGTTCCCGG TCGCCGGAAC ACTGATGATC GAGCCGACCG AGAGTGAATC CCGAGAAGAA
CTGGACCGCT TCTGCGATGC CATGATCAAG ATCCGCGAAG AAATCCGCGC AGTTGAAAAC
GGCACCCTGG ACAAGGATGA CAACCCGCTG AAAAACGCGC CGCACACCGC TGCCGAAATC
GTCGGCCAGT GGAGCCATCC TTACAGCCGC GAACAGGCGG TGTACCCGGT CGATTCACTG
ATCGAGAACA AGTACTGGCC TCCGGTCGGT CGTGTCGACA ACGTCTTCGG CGACCGCAAC
CTGGTATGCG CCTGCCCGTC CATCGAGAAC TATCAGGAAG CGTGA
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| Protein sequence | MTDRIELTTA NEFIARHIGP RAADELAMLQ TLGFDSIEAL SESVIPESIK GTSVLNLPAG
QSEADALASI KAIASKNQLF KTYIGQGYYN THTPAPILRN LLENPAWYTA YTPYQPEISQ
GRLESLLNFQ TLISDLTGLP IANASLLDEA TAAAEAMTFC KRLSKNKASQ QFFASSHCHP
QTLDVLRTRA EPLGITVVVA DEHELGDVSD YFGALLQYPA SNGDVFDYRE LVERFHAANA
LVAVAADLLA LTLLTPPGEF GADVAIGSAQ RFGVPLGFGG PHAAYFSTRD AFKRDMPGRL
VGVSVDRHGK QALRLAMQTR EQHIRREKAT SNICTAQVLL ANIASMYAVY HGPRGLTQIA
NRVHQLTAIL AEGLSTLGLN AEQAFFFDSL TLHTGDRTAA LHAAARARHI NLREIDDQRL
GLSLDETTSQ SAVETLWAIF ANDGQSLPDF AALADSVQSR LPAGLLRQSA ILSHPVFNRY
HSETELMRYL RKLADKDLAL DRTMIPLGSC TMKLNAASEM IPVTWAEFGN LHPFAPAEQS
AGYQQLTDEL EAMLCAATGY DAISLQPNAG SQGEYAGLLA IRAYHQSRGD EHRDICLIPS
SAHGTNPATA NMAGMRVVVT ACDARGNVDI EDLRAKAVQH RDQLAAIMIT YPSTHGVFEE
GIREICGIVH DNGGQVYIDG ANMNAMVGLC APGKFGGDVS HLNLHKTFCI PHGGGGPGVG
PIGVKSHLAP FMPGHARMER KEGAVCAAPF GSASILPITW MYIRMMGGEG LKRASQLAIL
NANYISRRLE EHYPVLYTGS NGLVAHECIL DLRPIKDSSG ISVDDVAKRL IDFGFHAPTM
SFPVAGTLMI EPTESESREE LDRFCDAMIK IREEIRAVEN GTLDKDDNPL KNAPHTAAEI
VGQWSHPYSR EQAVYPVDSL IENKYWPPVG RVDNVFGDRN LVCACPSIEN YQEA
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