| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1086 |
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| Symbol | valS |
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| ID | 3366580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1227714 |
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| End bp | 1230560 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651429 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_234180 |
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| Protein GI | 66044339 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA CTTACCAGCC GCACGCCATC GAAACTTCCT GGTACCAGAC CTGGGAGTCC
GAGAACTACT TCGCTCCGCA AGGCGTGGGT GACTCGTACA CCATCATGAT TCCGCCGCCG
AACGTCACCG GCAGCCTGCA CATGGGCCAC GGTTTCAATA ACGCGATCAT GGATGCACTG
ATCCGTTTCC GTCGCATGCA GGGCCGCAAT ACGCTGTGGC AACCGGGCAC CGACCATGCG
GGTATCGCCA CGCAGATGCT GGTCGAGCGT CGTCTCGAAG CGCAAGGCGT AAGCCGTCAT
GAACTGGGCC GCGAGAAGTT TCTGGACAAG ATCTGGGAAT GGAAAGCCGA GTCCGGCGGC
AACATCAGCC GCCAGATCCG CCGCCTGGGC TCGTCCGTCG ACTGGAGCCG CGAGCGCTTC
ACCATGGACG ACGGCCTGTC CGAAGCGGTA AAGGAAGCTT TCGTGCGTCT GCATGAAGAC
GGCCTGATCT ACCGTGGCAA GCGCCTGGTC AACTGGGACA CCAAGCTGCA CACCGCCATT
TCCGACCTCG AAGTGGAGAA CCACGACGAG AAAGGTCATC TGTGGAACCT GCGTTATCCA
CTGGCTGACG GCGCAAAGAC CGCTGAAGGT CTGGATTACC TGATCGTAGC CACCACGCGC
CCGGAAACCA TGCTCGGTGA TGCCGCCGTT GCGGTGAACC CGGAGGACGA GCGCTACAAG
GCGCTGATCG GCAAGTTCGT CGAATTGCCT CTGGTAGGCC GCCGCATCCC GATCATCGCG
GATGATTACT GCGATCCCGA GTTCGGCACC GGCTGCGTGA AAATCACCCC GGCCCACGAT
TTCAACGACT ATGAAGTCGG CAAGCGCCAC AACCTGCCGC TGCTGAACAT TTTCGACAAG
AATGCCAACG TATTGCCCGC CGCTCAGGTG TTCAACCTTG ATGGCACATT GAACGAAAGC
GTCGACGGCA GCCTGCCTGC AGCCTATGCC GGGCTGGATC GCTTCGAAGC GCGCAAACAG
ATTGTTGCCG CGTTCGACGC CGCCGGGTTG CTGGTCAGCG TTGATGATCA CGCCTTGAAG
GTGCCGAAAG GCGACCGCTC CGGCACCATC ATCGAGCCGT GGCTGACCGA TCAGTGGTAC
GTCTCCACCA AGCCGCTGGC CGAACCTGCG ATTGCCGCTG TCGAAGACGG CCGCATCGCG
TTCGTGCCCA AGCAATACGA AAACATGTAC TTCTCGTGGA TGCGCGACAT CCAGGACTGG
TGCATCAGCC GTCAGCTCTG GTGGGGCCAC CGCATTCCGG CCTGGTACGA CGAATCCGGC
AAGGTTTACG TCGGCCGCGA CGAAGCCGAA GTCCGTGCCA AGAACAACCT GGGGCCGGAA
GTCGCGCTGC AGCAGGACAA CGACGTGCTG GACACCTGGT TCAGCTCGGG CCTGTGGACC
TTCTCCACGC TCGGCTGGCC GGAAAAGACC AAGGCACTGA AAACTTTCCA CTCCACCGAC
GTGCTGGTCA CCGGCTTCGA TATCATTTTC TTCTGGGTCG CCCGGATGAT CATGCTCACC
ATGCACTTGG TGAAGAACGA GGACGGCACG CCGCAAGTCC CGTTCAAGAC TGTCTATGTG
CATGGTCTGG TGCGCGATGG CCAGGGCCAG AAGATGTCCA AGTCCAAGGG CAACGTGCTT
GACCCGCTGG ACATCGTCGA CGGTATCGAC CTCGAAACGC TGGTAGAGAA ACGCACCAGT
GGCCTGATGC AGCCGCAACT GGCGAAAAAG ATCGAGAAGC AGACCCGCCA GGAATTCGCC
GACGGCATCG CCAGCTATGG CACCGATGCC CTGCGCTTTA CCTTCTGCTC GCTGGCGTCC
ACCGGTCGCG ACATCAAGTT CGACATGGGC CGCGTCGAAG GCTACCGCAA CTTCTGCAAC
AAGATCTGGA ACGCGGCGCG CTACGTACTG GACAAGGGCG AAGACTGCGG CCAGAACGGC
GAAGCGGTCG AACTGTCGCT GGCTGATCGC TGGATCATCT CGCAGTTGCA GCGCACCGAA
GCCGAAGTGA CCCGCCAGCT GGATCAGTTC CGCTTTGACC TCGCCGCCCA GGCGTTGTAC
GAGTTCATCT GGAACCAGTA TTGCGACTGG TATCTGGAAC TGTCCAAGCC GGTACTGTGG
GACGAGACAG CGCCGGTCGA GCGTCAGCGC GGCACACGCC GCACACTGGT TCGCGTTCTG
GAAGTGGCGT TGCGTCTTGC GCACCCGTTC ATGCCGTTCA TCACCGAAGA AATCTGGCAG
CGCCTCGCGC CGCTGGCCGG TGCGCAAGGC AAGACCATCA TGCTGCAACC CTGGCCGGTG
GCCAATGAAG CACGCATCGA TCAGGCGGCC GAAGACGACA TCGAATGGCT CAAGGGCCTG
ATGCTCGCCG TGCGTAACAT CCGTGGCGAG ATGAACATCG GTCCGGGCAA GCCGCTGCAA
CTGTTCCTCA AGAACGTCAG CGCCGAAGAT CAGCGTCGTT TGAGCGAAAA CGATTACCTG
CTCAAGAAGC TCGCCAAGCT CGAATCCATG ACCGTACTGA CCGAAGGCGC AGAAGCACCG
CTGTCCGCCA CCGCGCTGGT CGGTGATATG GAAGTGCTGG TACCGATGGC CGGGTTGATC
GACAAAGGGG CCGAGCTGGC GCGCCTGGAC AAGGAAATCC AGCGCCTGCA AGGCGAAGTG
CAACGCGTCG GCGGCAAGCT GTCCAACGCC GCCTTCGTCG ACAAGGCACC GCCTGAAGTC
ATCGCCAAGG AACGCGCCAA GCTGACCGAA GCCGAACAGG CACTGGGCAA GCTGGCCGAG
CAACACGCAC GCATCGCCAG CCTGTAA
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| Protein sequence | MDKTYQPHAI ETSWYQTWES ENYFAPQGVG DSYTIMIPPP NVTGSLHMGH GFNNAIMDAL
IRFRRMQGRN TLWQPGTDHA GIATQMLVER RLEAQGVSRH ELGREKFLDK IWEWKAESGG
NISRQIRRLG SSVDWSRERF TMDDGLSEAV KEAFVRLHED GLIYRGKRLV NWDTKLHTAI
SDLEVENHDE KGHLWNLRYP LADGAKTAEG LDYLIVATTR PETMLGDAAV AVNPEDERYK
ALIGKFVELP LVGRRIPIIA DDYCDPEFGT GCVKITPAHD FNDYEVGKRH NLPLLNIFDK
NANVLPAAQV FNLDGTLNES VDGSLPAAYA GLDRFEARKQ IVAAFDAAGL LVSVDDHALK
VPKGDRSGTI IEPWLTDQWY VSTKPLAEPA IAAVEDGRIA FVPKQYENMY FSWMRDIQDW
CISRQLWWGH RIPAWYDESG KVYVGRDEAE VRAKNNLGPE VALQQDNDVL DTWFSSGLWT
FSTLGWPEKT KALKTFHSTD VLVTGFDIIF FWVARMIMLT MHLVKNEDGT PQVPFKTVYV
HGLVRDGQGQ KMSKSKGNVL DPLDIVDGID LETLVEKRTS GLMQPQLAKK IEKQTRQEFA
DGIASYGTDA LRFTFCSLAS TGRDIKFDMG RVEGYRNFCN KIWNAARYVL DKGEDCGQNG
EAVELSLADR WIISQLQRTE AEVTRQLDQF RFDLAAQALY EFIWNQYCDW YLELSKPVLW
DETAPVERQR GTRRTLVRVL EVALRLAHPF MPFITEEIWQ RLAPLAGAQG KTIMLQPWPV
ANEARIDQAA EDDIEWLKGL MLAVRNIRGE MNIGPGKPLQ LFLKNVSAED QRRLSENDYL
LKKLAKLESM TVLTEGAEAP LSATALVGDM EVLVPMAGLI DKGAELARLD KEIQRLQGEV
QRVGGKLSNA AFVDKAPPEV IAKERAKLTE AEQALGKLAE QHARIASL
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