| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1079 |
|---|
| Symbol | |
|---|
| ID | 3366573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1222071 |
|---|
| End bp | 1222562 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637651422 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234173 |
|---|
| Protein GI | 66044332 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02246] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACG AAGAACAAAG TCAGGCCAAC AGCGCACTGA TCACCCGGTT TTATGAGGCG
TTTGCGCAGC TGGATGCCGA GGCGATGAGT GCCTGCTATA CCGATGACGT GTTGTTCAGC
GACCCTGCCT TTGGTGAATT GCGCGGTGAT CAGGTCGGTG ACATGTGGCG CATGCTGACT
TCCCGGGCAA AGAATTTTTC GGTGGTCTTC GATCAGGTGC GAGCCGATGA CCAGACTGGC
AGTGCGCACT GGGTGGCGAC GTACCTGTTC AGTCAGACCG GGCGCACGGT GGTCAACGAT
ATTCAGGCCC GTTTCGTGTT TCGTGATGGC AGGATCTGCG AGCATCGCGA TCATTTCGAT
ATGTGGCGCT GGTCGCGCCA GGCCCTGGGT TTGAAGGGCC TGTTGCTTGG CTGGACGCCT
TTGGTGCGCA ACGCCGTCAG GGCTCAGGCG CTCAAGGGCC TGAAGACCTT TTCAGAGAGC
CGCCGTGCCT GA
|
|---|
| Protein sequence | MNYEEQSQAN SALITRFYEA FAQLDAEAMS ACYTDDVLFS DPAFGELRGD QVGDMWRMLT
SRAKNFSVVF DQVRADDQTG SAHWVATYLF SQTGRTVVND IQARFVFRDG RICEHRDHFD
MWRWSRQALG LKGLLLGWTP LVRNAVRAQA LKGLKTFSES RRA
|
|---|
| |