| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1074 |
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| Symbol | |
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| ID | 3366568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1217239 |
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| End bp | 1218336 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651417 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_234168 |
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| Protein GI | 66044327 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0912852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAACTC ATACTTTCAA ACCTGATATG CCACCACCGG GCAAAGTGTT CGGCCCGATG
GCGTGGATGC GGCAGAACCT GTTCTCCAGC TGGATCAACA CCCTGCTGAC CCTGTTCTCG
CTGTATCTGA TCTATCTGGT CGTACCACCG ATCATCAGTT GGGCCCTGCT GGACGCCAAC
TGGATCGGCA CGACCAAGGC AGACTGCACC AAGGCGGGCG CCTGCTGGGT GTTCATCGAG
CAGCGCTTCG GTCAGTTCAT GTATGGCTAC TTCCCCAATG AACTGCGCTG GAGGGTCGAC
CTGACCGCCA TCCTGGCGAT CGTCGGCGCT GCGCCGCTGT TCATCTCGAA GTTTCCGCGC
AAGGCTGTCT ACGGTATTGC CTTCCTGGTG ATCTACCCGG TTGTCGCGTT CTACCTGCTG
CATGGCGGCG CGTTCGGTCT GACCAACGTA CCGACCAGCC AGTGGGGCGG TCTGATGCTG
ACCCTGGTGA TCGCCACCGT GGGTATCGTC GGTGCCTTGC CGCTGGGTAT CCTGCTGGCG
CTCGGTCGTC GTTCCAACAT GCCGGCCGTG CGTGTGGTGT GCGTGACCTT CATCGAGTTC
TGGCGCGGCG TGCCGCTGAT CACCGTGCTG TTCATGTCGT CGGTGATGCT GCCGCTGTTC
ATGCCAGAGG GCATGAACTT CGACAAGCTG CTGCGTGCGC TGATCGGCGT CATCCTGTTC
CAGTCCGCGT ACATCGCTGA AGTGGTGCGT GGCGGCATGC AGGCCATTCC CAAGGGCCAG
TACGAAGCTG CCTCGGCGAT GGGCCTGGGT TACTGGCGCA GCATGGGTCT GGTGATCCTG
CCGCAGGCGT TGAAGATGGT CATTCCCGGC ATCGTCAACA CCTTCATTGC CTTGTTCAAG
GACACCAGTC TGGTGATCAT TATCGGTCTG TTCGACCTGC TCAACAGCGT CAAGCAGGCT
ACCGCCGACC CGGCATGGCT GGGTATGGCC ACTGAAGGCT ACGTCTTCGC GGCCCTGGTG
TTCTGGATCT TCTGTTTCGG TATGTCCCGC TATTCCATGC ATTTGGAACG TAAGCTGGAC
ACAGGCCACA AGCGTTAG
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| Protein sequence | MTTHTFKPDM PPPGKVFGPM AWMRQNLFSS WINTLLTLFS LYLIYLVVPP IISWALLDAN
WIGTTKADCT KAGACWVFIE QRFGQFMYGY FPNELRWRVD LTAILAIVGA APLFISKFPR
KAVYGIAFLV IYPVVAFYLL HGGAFGLTNV PTSQWGGLML TLVIATVGIV GALPLGILLA
LGRRSNMPAV RVVCVTFIEF WRGVPLITVL FMSSVMLPLF MPEGMNFDKL LRALIGVILF
QSAYIAEVVR GGMQAIPKGQ YEAASAMGLG YWRSMGLVIL PQALKMVIPG IVNTFIALFK
DTSLVIIIGL FDLLNSVKQA TADPAWLGMA TEGYVFAALV FWIFCFGMSR YSMHLERKLD
TGHKR
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