| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1073 |
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| Symbol | |
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| ID | 3366567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1216047 |
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| End bp | 1217228 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637651416 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_234167 |
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| Protein GI | 66044326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.391566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGC AAATCGTCGC ACCCAAGCAA AAGCTCTCTC TGAGCGATCC GAAAGTGCGC
GCGTGGTTAT TTCAGATCAT CACTGTCGTG GCGGTGATCG CGTTGGGCTG GTTCATTTTC
GACAACACCC AGACCAACCT GCAACACCGT GGTATTACCT CGGGTTTCGG TTTTCTTGAG
AACAGTGCCG GTTTCGGTAT CGCTCAGCAC CTGATCGACT ACAGCGAAGC GGACAGCTAT
GCCCGTGTGT TCGTCATCGG CCTGCTGAAT ACCTTGCTGG TGTCGGTTAT CGGTATCGTC
CTGGCGACCT TGCTGGGCTT TGTCATTGGT GTCGCTCGCC TGTCTCCGAA CTGGATGATC
AGCAAGCTGG CCACCGTGTA TGTCGAAGTC TTCCGCAACA TTCCACCGCT GCTGCAGATC
CTGTTCTGGT ACACCGCCGT ATTCCTCACG CTGCCTGGTC CGCGTCAGGC GCATGGCTAT
CTGGACATGT TCTTCGTCAG CAGCCGCGGG CTCAACATGC CCAGAGCATT GCCTGCCGAA
GGCGCCTGGG CATTCCTGAT CAGTCTGGTG GTTGCCGTGA TCGCCATCGT CATGATGGTG
CGCTGGGCCA ACAAGCGCTT CGAAGCCACC GGCCAGCCGT TTCACAAGTT CTGGGTCGGC
CTGGCGTTGT TGCTGGTTAT CCCCGGTCTG AGCATGCTGA TCTTCGGCAG CCCGGTGCAT
TGGGAGCTGC CGCAGCTGAA GGGCTTCAAT TTCTCGGGCG GCTGGGTGCT GATCCCTGAA
CTGATCTCCC TGACCCTGGC ACTGACTATC TATACGGCGG CGTTCATCGC TGAAATCGTG
CGTTCCGGCA TCAAGTCGGT CAGCCATGGC CAGACCGAAG CTGCTCGCTC ATTGGGCCTG
CGCCCTGGGC CGACGCTGCG CAAGGTGATC ATCCCGCAGG CGCTGCGCGT GATCATTCCG
CCGCTGACCA GTCAGTTCCT GAACCTGGCG AAGAACTCTT CGCTGGCAGC CGCCATCGGC
TACCCGGAAA TGGTTTCCCT GTTCGCCGGT ACGGTGCTCA ACCAGACCGG GCAGGCCATT
GAAGTCATTG CCATCACCAT GAGCGTGTAC CTGGCGATCA GTATCAGCAT TTCCCTGCTG
ATGAACTGGT ACAACAAGCG CATTGCGCTG ATCGAGCGGT GA
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| Protein sequence | MEKQIVAPKQ KLSLSDPKVR AWLFQIITVV AVIALGWFIF DNTQTNLQHR GITSGFGFLE
NSAGFGIAQH LIDYSEADSY ARVFVIGLLN TLLVSVIGIV LATLLGFVIG VARLSPNWMI
SKLATVYVEV FRNIPPLLQI LFWYTAVFLT LPGPRQAHGY LDMFFVSSRG LNMPRALPAE
GAWAFLISLV VAVIAIVMMV RWANKRFEAT GQPFHKFWVG LALLLVIPGL SMLIFGSPVH
WELPQLKGFN FSGGWVLIPE LISLTLALTI YTAAFIAEIV RSGIKSVSHG QTEAARSLGL
RPGPTLRKVI IPQALRVIIP PLTSQFLNLA KNSSLAAAIG YPEMVSLFAG TVLNQTGQAI
EVIAITMSVY LAISISISLL MNWYNKRIAL IER
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