Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1066 |
Symbol | |
ID | 3366560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1209311 |
End bp | 1210705 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637651409 |
Product | PhoH-like protein |
Protein accession | YP_234160 |
Protein GI | 66044319 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.128734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGACC ACGGACGCAC CCCTTCCACC AACCAGCCAA TCCTTTACGT GCTCGATACC AACGTATTGA TTCATGATCC AAACGCACTG CTGAACTTCG AAGAACACCA CGTCGCCATC CCCATGACGG TTCTGGAGGA ACTGGACAAA CTCAAGGCCG GTAAACATTC GGTTGCTGCC GAATGCCGCC AGGCCATCCG CCTGATCGAC AAGACCCTGG GCGAAGCTTC GCCGGAGGAA GTCGAGAAGG GCGTGCCCAT CGACCGTGGT ACAGGCGTGC TCAAGGGCTA CCTGTCGATT TTGATGAGCA AACGCGAGGA ACCCAACAGC CTGCTGCCCG AGCACCTGAA CGACAACATC ATCATCAACC AATTGATTGA CCTGCACGCG CGCAACAAGG ACTTGAGCGT CGTGCTGGTG ACCAAAGACA TCAACATGCG CCTCAAGGCG CGCGCTTGCG GCATTGCTGC CGAGGATTAC AGCACCGACC AGCTGGTCGA TGACGTTTCA CTGTTGTCGC GTGGCTACCA TGACATGAGC GGTTCGTTCT GGGACCGCGT CAGCAAGGTC GACACCCGTC AGGAGCGCGG CCGTACCTGG CACCGCGTGC AGCTCACTGA AATGCTGCCG GCGGTTCATA TCAACGAGTT CATTGTCGAT GAGCAGGGCT TCGTAGGCTG GATCAAGGGC GTCAAGAACG ACGAGCTGCT GATTCTCGAC ATGCACCAGG AGCCTTTGCT GCATCAGGAG GCCTGGGGGC TGAAGCCACG CGACATCTAT CAGGGGCTGG CGCTGTTCGC GCTGCTCGAC CCGGATATTC ATCTGGTCAA CCTGTCAGGC GCTGCTGGCT CGGGTAAAAC CATTCTGGCC CTGGCCGCTG CCATCGAGCA GACCATGGTC ACCAAGCGCT ATCGGCGCAT CATCGCCACC CGCAGCGTTC AGGGTCTGGA TCAGGAAATC GGTTTCCTGC CCGGCACCGA GGCGGAGAAG ATGGAGCCAT GGCTTGGCGC GATCACCGAT AACCTCGAAG CGTTGCACAT GGATGACGAA AACACCCATG GCAGTGTCGA CTACATCCTC AGCAAGGTGC CGTTGCAGTT CAAATCCCTC AACTACATTC GAGGTCGCAG CTTCCAGCAA AGCCTGATCC TGATCGATGA ATGTCAGAAC CTGACCCCGC ACCAGATGAA AACCATCATC ACCCGTGCCG GCGCCGGTTC CAAAGTGGTC TGCCTGGGCA ACCTGGCGCA GATCGACACC CCTTACCTGT CGGCCACCAG TTCCGGGCTG ACCTACCTGA CGGAGCGCTT CAAGGACTTC CCTAACGGCG TGCACATCAC CCTGCAAGGC GTGCCACGCT CGATACTGGC CGAATACGCG GAGAGTCATC TTTAG
|
Protein sequence | MDDHGRTPST NQPILYVLDT NVLIHDPNAL LNFEEHHVAI PMTVLEELDK LKAGKHSVAA ECRQAIRLID KTLGEASPEE VEKGVPIDRG TGVLKGYLSI LMSKREEPNS LLPEHLNDNI IINQLIDLHA RNKDLSVVLV TKDINMRLKA RACGIAAEDY STDQLVDDVS LLSRGYHDMS GSFWDRVSKV DTRQERGRTW HRVQLTEMLP AVHINEFIVD EQGFVGWIKG VKNDELLILD MHQEPLLHQE AWGLKPRDIY QGLALFALLD PDIHLVNLSG AAGSGKTILA LAAAIEQTMV TKRYRRIIAT RSVQGLDQEI GFLPGTEAEK MEPWLGAITD NLEALHMDDE NTHGSVDYIL SKVPLQFKSL NYIRGRSFQQ SLILIDECQN LTPHQMKTII TRAGAGSKVV CLGNLAQIDT PYLSATSSGL TYLTERFKDF PNGVHITLQG VPRSILAEYA ESHL
|
| |