Gene Psyr_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1058 
Symbol 
ID3366552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1197396 
End bp1199006 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content58% 
IMG OID637651401 
Productparallel beta-helix repeat-containing protein 
Protein accessionYP_234152 
Protein GI66044311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0674089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTC ATACAAGCAA CGGGCGCAGC CGGCACTGGC CGCACGCCCT GCTCGAAAGC 
GCACTGCTGA CCAGCGCTCT GCTGCTGGCC AGCGGTGTGG CGCTGGCCAA CGCGCCTGTC
GTACCCGACA CACAGAAGGC GGTGGTCAAG GAGCTGCACC AGGCCAAGAC CTACACCATC
ACCAGCCCGC CCACCGCGCC GCTGGAAATG GCCAAGCCGG TACTGCCCGA CCTCAAGGGC
TATACCGCTG AAGCGGCGCT GAAAAAGATC GTGCGCAACA AGCCGGGCAA GGTCACTGTT
TCGCGGATGA TGGAAGAAAC CGGCCTGAAG GAATTTATCG GCGGTGACAA CAAGATGGCC
GAATGGGTCA ACCGTCAGCG CGGCATCCCG CAGGCCATCA TGATTTCCGA CGGCTACGTG
AACCTGCAGG ACCTGGCCAA GAAAGTGCCC AAGCAGTTCC TCAACGAAGT CTCGCCAGGT
GTCTACGTGG CGCGCCTGCC GATCCTGATC AAGGAAACCG GGACCTTCGA GATCGACAGC
AAGACCAAGG AATTGCGTCT GTCTCAGGAA AAGGGTTCGT TCATCGTCAG TGAAGGCAAG
ATGCTGATCA CTCACACTCA GGTCAATGGC TGGAGTGAAA CCCGCAACAG CCTGGCGACC
TATCGCAAGC CTGAAGAGTT TCGCCCGTTC CTGCTGACCT GGGGTGGCTC GGAAACCTGG
ATCGCCAACA CCAAAATGGC GAGCCTGGGC TACGACCAGA GCAAGTCCTA CGGCATCAGT
ATTTCCCAGT ACACGCCCAA CACCGCGAAG GTGCTCAAGC GTCCCGAACC GACCGGCTGG
ATCATCGATT CAGAATTCTC GGACATGTGG TACGGCTTCT ACTGCTATGA AACCCGCGAC
TTCGTGGTCA AGGGCAACAC CTACCGCGAC AACATCATTT ACGGCATTGA CCCGCACGAC
CGTTCGCACG GTCTGATCAT CGCCGAAAAC GACGTTTACG GGACCAAGAA GAAGCACGGC
ATCATCATTT CCCGGGAAGT GGACAACAGC TTCATCTTCC GCAACAAGAG CCACAACAAC
AAATTGTCCG GCGTGGTTCT GGACCGTAAC AGCGTCGGCA ACATCGTCGC CTACAACGAG
ATTTACCAGA ACCACACCGA CGGCATCACC CTGTACGAAA GCGGCAACAA CCTGCTGTGG
GGCAATCGCG TGATCGCCAA CCGCCGCCAC GGTATCCGCG TACGTAACAG TGTGAACATC
AAGCTGTACG AGAACGTCGC CATGGGCAAC GGCCTGATGG GCGTTTACGG CCACATCAAG
GACTTGAGCG ACACCGACCG CGACATCGAG CTCGACCCGT TCGACGCTCA GGTATCGCTG
ATCATGGTTG GCGGCGAACT GTCCAGCAAT GGCTCCGGCC CGCTGTCCAT CGACTCGCCA
CTGAGTGTCG AGCTGTATCG CGTCTCGATG CTGATGCCTA CCAAAGAAGT CGGCATCAGC
CTCAACGGCG TCCTCGGTGA GCGCCAGGAC GAAATCCTCG ACCTGCTGGT ACGCCAGAAA
AAAGCCGTAT TGATCGACCC CGTCGAAAGC CAGACCGAGC TGCGGGAATG A
 
Protein sequence
MNSHTSNGRS RHWPHALLES ALLTSALLLA SGVALANAPV VPDTQKAVVK ELHQAKTYTI 
TSPPTAPLEM AKPVLPDLKG YTAEAALKKI VRNKPGKVTV SRMMEETGLK EFIGGDNKMA
EWVNRQRGIP QAIMISDGYV NLQDLAKKVP KQFLNEVSPG VYVARLPILI KETGTFEIDS
KTKELRLSQE KGSFIVSEGK MLITHTQVNG WSETRNSLAT YRKPEEFRPF LLTWGGSETW
IANTKMASLG YDQSKSYGIS ISQYTPNTAK VLKRPEPTGW IIDSEFSDMW YGFYCYETRD
FVVKGNTYRD NIIYGIDPHD RSHGLIIAEN DVYGTKKKHG IIISREVDNS FIFRNKSHNN
KLSGVVLDRN SVGNIVAYNE IYQNHTDGIT LYESGNNLLW GNRVIANRRH GIRVRNSVNI
KLYENVAMGN GLMGVYGHIK DLSDTDRDIE LDPFDAQVSL IMVGGELSSN GSGPLSIDSP
LSVELYRVSM LMPTKEVGIS LNGVLGERQD EILDLLVRQK KAVLIDPVES QTELRE