| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1051 |
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| Symbol | |
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| ID | 3366545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1186670 |
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| End bp | 1189453 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637651394 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_234145 |
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| Protein GI | 66044304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAAC GCTCGATTGC CCTTCATCAG CACACGCCGG CATTACAGTT GGTGGACCCG
CGTGGCTTGC CTGTGGCGTC GATTTTGCTG CATCGCTCAA GCATCGACCA CGAGCCGGAA
CTCCGTACCA GCCAGGCGTC ATTCGACCTT GCCAGTCGAC CTGTCAGCCA TTGGGATCCG
CGCCTGTGGG CTGATCGGGC ACCTGCCAAT CTCAGCGTCA TTCATTCGCT CGGCGGTCGG
GTTCTGGCCA GCGACAGTGT GGACGCTGGC TGGCGAGTGT TGCTGGCGGG GGAGGCCGGG
CAGGTAGTGG AAGCCTGGGA CGCTCGGGGC GTTGTGCGAC GTACTCAGTA CGATGCGCTG
CTAAGGCCCA CCGAAGTTTT TGAAGATGAG CACTGCGTTG AGCGCTTGCT TTATGGCGGC
CCTGACTCGA CCGCATATAA CCAGTGCGGT CAGTTGATTC GTCATGATGA TCCGGCAGGC
ACGCGGCTTG ATGATGCGTA CGGTCTTTCG GGAAGTGTTA TTCGTCAAAC GCGGCGCTTT
CTGCACTCTG CCAATGAGCC TGACTGGCCC GCGTCGATGG CCGGGCGTGA TGTCTTGCTG
GAACCCGGCG ACGGCGCAAC CACCTGCTGG CACTACAACC CGTTGAACGA AACAATTCGG
CAAATCGATG CGCAGGGCAA TGTTCAGTTG CTGGATTACA CCGTTGCGGG GCAGTTGAAA
AACAGTCGTT TGCAACTGAA CTGTCAGGCT GAACAGGTTT TGGTCAGTGC CATTCAATAC
GACGCGCAGC AGCGGGTGGT GTCGGAAACG GCTGGCAATG GTGTGATCAG CACGGCGCTC
TATGCCACTG AAGACGGTCG TCTGCTGGCG TTGAGTGCCA GACGGGCCGA TGGGCTGATG
CTGCAGGACT TGCTGTACGA CTACGACCCG GTCGGTAATG TCATCCGTAT CGAGGACCGC
GCTCAGTCAA CGGCTTATAA CCGCAATCAG CGCATTGATC CTGTTTCGGC CTATGGCTAC
GACACGCTGT ACCAACTGAT CGAAGCCACA GGTCGGGAAT CAGCGGTCGT CAATCACGGT
CCGGTGTTTC CGGGTTTTCA AAGCCCTGCC GACCCTGCGC AACTGGCCAA TTACACCCAG
ACCTACCGCT ACGACGCGGG TGGCAACCTG CAACAGCTTA CCCATACAGG CGCGCAGTCC
CATTCGCGAA CGCTGGTGAC TGCGCGTTAC AGCAACCGCA GTCTGCCGGT GATCAATGAC
CATATACCCG ATGAAGCAGA AATCGCTGCA GCCTTCGACG CCAATGGCAA TTTGCTCGCC
CTGCAAGCCG GGCAAAACCT GAGCTGGGAC CGGCGCAACC AGTTGCAGCA AGTGCGTCCA
GTGGTTCGCG ATGACGCTGC GGACGACAGC GAACGCTATA TATACGACGC CAGCGGCCAG
CGCCTGCGCA AGGTGCGTAC CACGCAAGCC AAAACCATTA CCCATACGGC CGATGTGCGT
TACCTGCCCG GTCTTGAAAT CCGTACCGAT ACGGCCACTG GCGAAACCCT GCACGTTGTT
GTGGCCCAGG CCGGGCGCAA TAACGTGCGC GTGCTGCATT GGGCGTCTGG AAAGCCCGAC
GCGCTTGAAA ATGATCAGAC TCGCTACACA GTGAACGACC ACCTGGGGTC CGGCACGCTT
GAACTGGACG CGCAGGGGCA ACTGATCAGT CAGGAAAGTT ACTACCCGTT TGGCGGAACA
TCATGGTGGG CAGGTCGAAA TGCCATCGAA GCGAACTACA AGACCGTGCG TTACTCGGGC
AAGGAACGCG ATGCGACGGG GCTTTATTAT TACGGGATGC GGTATTACGC GCCGTGGTTA
CAGCGCTGGA TCAATCCGGA CCCGGCTGGG CTTGAAGACG GGCTTAATCT ATACGGTATG
TTGAGAAACA ATCCGCTCAC CTTCATCGAC GCTGCGGGAG AAGTCGCTGA AATCCCCAAG
CATATTCATT ACATCTGGTT GGGCGCTGCG GAACCACTGA TGAAGCACCT GGGAGGGATT
GAAAACACTT CTGTGCTGAA CCCTGACTAT CAATTGACGC TGCATCTGCA TCTGGACCTG
CGAAAGGGTG ATGAAACGGA AATAGTTGCA GCGCTGCGCG GGCGAAGGAA CGTCCATATT
TCCGATCTCA GGGAAGAAGA ATTTTTCAGA AAATTCCAGA AAACCCCGTC GTACGAGATT
TATAAGGATT TGTATGGGGA TGACCCTCGA CACTACTCTG CAGCCAGTGA CGTGCTTCGC
TACAGCTTGA TCAACCATTA TGGCGGTATT TATTCGGACA CGGACGACAT GTTCAAGCGC
GGTGTCAGGG ATACCGATTT CATTCCCAAG CCCAAGAGGA TTTTCACGAT GCGCCCGACG
GACACACCTT GGAACCGGGA TGAAATCGTG ATTAACAATA ATTCGTTCGC GTCACCTGCC
AACAATCCGG TGCTGAGCAC CTTGGAAAAG GAGATCGTCG ACCGGTACAG CGTTTATCGT
GAGACTGGCC TTGGCGCAGT GCTCAGTAGC ACCGCCGATG TGAATGACAG GATGAGAATC
GTTTCTGCTG TCACGGGGCC CAGGGTGTTC ACAGAGGTAT TGCTTAAAGA GGGGCGCGGG
CTGAGCAAGC TGTTTTCAAC GATGATCGAT CACCATATTA AAGGTAAACC ATTAAAAAAC
CCGAAGCGTT ATCAGGCAGA AGCCCAAAAA AGAATGCCAC TCTCGAACTT CATAAACATG
GGAGGCAGCC ACTCATGGAA ATAG
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| Protein sequence | MVERSIALHQ HTPALQLVDP RGLPVASILL HRSSIDHEPE LRTSQASFDL ASRPVSHWDP
RLWADRAPAN LSVIHSLGGR VLASDSVDAG WRVLLAGEAG QVVEAWDARG VVRRTQYDAL
LRPTEVFEDE HCVERLLYGG PDSTAYNQCG QLIRHDDPAG TRLDDAYGLS GSVIRQTRRF
LHSANEPDWP ASMAGRDVLL EPGDGATTCW HYNPLNETIR QIDAQGNVQL LDYTVAGQLK
NSRLQLNCQA EQVLVSAIQY DAQQRVVSET AGNGVISTAL YATEDGRLLA LSARRADGLM
LQDLLYDYDP VGNVIRIEDR AQSTAYNRNQ RIDPVSAYGY DTLYQLIEAT GRESAVVNHG
PVFPGFQSPA DPAQLANYTQ TYRYDAGGNL QQLTHTGAQS HSRTLVTARY SNRSLPVIND
HIPDEAEIAA AFDANGNLLA LQAGQNLSWD RRNQLQQVRP VVRDDAADDS ERYIYDASGQ
RLRKVRTTQA KTITHTADVR YLPGLEIRTD TATGETLHVV VAQAGRNNVR VLHWASGKPD
ALENDQTRYT VNDHLGSGTL ELDAQGQLIS QESYYPFGGT SWWAGRNAIE ANYKTVRYSG
KERDATGLYY YGMRYYAPWL QRWINPDPAG LEDGLNLYGM LRNNPLTFID AAGEVAEIPK
HIHYIWLGAA EPLMKHLGGI ENTSVLNPDY QLTLHLHLDL RKGDETEIVA ALRGRRNVHI
SDLREEEFFR KFQKTPSYEI YKDLYGDDPR HYSAASDVLR YSLINHYGGI YSDTDDMFKR
GVRDTDFIPK PKRIFTMRPT DTPWNRDEIV INNNSFASPA NNPVLSTLEK EIVDRYSVYR
ETGLGAVLSS TADVNDRMRI VSAVTGPRVF TEVLLKEGRG LSKLFSTMID HHIKGKPLKN
PKRYQAEAQK RMPLSNFINM GGSHSWK
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