| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1040 |
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| Symbol | |
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| ID | 3366534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1175474 |
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| End bp | 1175977 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637651383 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_234134 |
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| Protein GI | 66044293 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.424597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCG CCCACTCCGC TCTCAATCAC ACTGTCGAAG GCCTGTACAG GGCACACAAC
GCCTGGCTGA CGACCTGGTT GCGACGCAGA CTCGGCTGCC CGCACAGCGC GGCGGACCTG
GCGCAGGACA CCTTTATCAA GGTGCTGGGC GCACGCGATA CAGCGCAAAT CGTCGAGCCG
CGAGCCTTTC TGACGACGAT TGCCAAGCGT GTGCTGTGCA ATCACTACCG GCGTCAGGAC
CTGGAGCATG CCTACTATCA GGCACTGGCC GAACTGCCGG AGCGCGTGGC GCCTTCGGAA
GAAGAGCGGG CGATCATTCT CGAAACCCTG GTCGAACTCG ATCAACTGCT GGACGGCCTG
CCAGCACTGG TCAAGCGGGC GTTTCTGCTG TCGCAGGTCG ACGGCTTGAG CCATGGCCGG
ATCGCTGCCG AACTGGGTAT CTCCATCGCC ACGGTCAAGC GTCATCTGCA CAAGGCCGCC
CTGCGCTGCT ATTTCGCCCT ATGA
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| Protein sequence | MPVAHSALNH TVEGLYRAHN AWLTTWLRRR LGCPHSAADL AQDTFIKVLG ARDTAQIVEP
RAFLTTIAKR VLCNHYRRQD LEHAYYQALA ELPERVAPSE EERAIILETL VELDQLLDGL
PALVKRAFLL SQVDGLSHGR IAAELGISIA TVKRHLHKAA LRCYFAL
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