Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1030 |
Symbol | nfrB |
ID | 3366524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1161268 |
End bp | 1163388 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637651373 |
Product | bacteriophage N4 adsorption protein B |
Protein accession | YP_234124 |
Protein GI | 66044283 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.196607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCGC TCTATTGGCC TTACTGGCTG GCCCATTACT ACAGCGTGCT GGAAGTCGCG ACGATCGTTG TCGGGCTGAT CATCCTGGTA TCGAGTATCG ATGACCTGTT CATCGATATC TGGTACTGGT CGCGCCGGCT GTACCGCAAG TTCACCGCCG AACGTCGCTA CCGGCCACTG ACTGCCGAGC AGTTGACTGC CCGTGACGAG CAGCCGCTGG CAATCATGGT CCCGGCCTGG CTGGAATACG ACGTCATCGC GCCGATGATC GAAAACATGG TGTCGACGCT CGACTATCAG AACTACGTGG TGTTCGTCGG CACTTACATC AACGACCAGC GCACCATCGA TGAAGTGGAG CGCATGCGTC GCCGCTACAA GCAGTTGCAC CGTGTGGAGG TGCCGCACGC CGGCCCGACC TGCAAGGCCG ACTGCCTGAA CTGGGTGATC CAGGCGATTT TCCTGTACGA GAAGACCCAC GCCGTACAGT TCGCCGGGAC TATCCTGCAC GACAGCGAAG ACGTGCTGCA CCCGCTTGAA CTGCGCCTGT TCAATTACCT GTTGCCGCGC AAGGACATGA TCCAGTTGCC GGTCGTGTCG CTGGAACGCA ACTGGTACGA ATGGGTAGCC GGCACCTACA TGGACGAGTT CGCCGAATGG CACGGCAAGG ACCTGGTGGT ACGCGAAAGC ATGACTGACA CCGTGCCTTC GGCCGGTGTC GGCACTTGCT TCTCGCGACG TGCGCTGATG GTGCTGGCGG ATGAAAACCA GAACCAGCCG TTCAATACCG AAAGCCTGAC CGAGGACTAC GACGTCGGCG CGCGACTGGC GAAGTACGGC ATGCAGGCGA TCTTCGTACG CTTCCCGGTG CAATTTCGGG TGCTGCGCAA ATCGTGGTTC CGCAAGCCTT ACGAATCGAC GCTGGAAATG CCGCTGTGCG TGCGCGAATT CTTCCCGGAC ACCTTCCGCA CTGCCTTTCG CCAGAAAGCG CGCTGGACGC TGGGTATCGG CTTGCAAGGC TGGGAGCAAA TGGGCTGGAC CGGCTCGCTG GCAAACCGTT ACCTGCTGTT TCGCGACCGC AAGGGTGTGG TGACATCGTT TATCAGCATC ATTGCCTACC TGATCCTCAT CCAGCTGCTG GCACTGATCG TTCTGCGCTC CAGCGGGCTG TGGAATACCA GCTTCCCGAC ACCGTTTGAA ACCACCGGAC TGATTCAGTA TCTGCTGGTG GCCAACGGCA TCGCACTGCT GTGGCGGATC CTGCATCGCT GCTACTTCAC CACCGTGCTT TACGGCTGGC AGCACGGTTT GCTGTCGATA CCGCGCATGG TGGTCGGCAA CTTCGTCAAC TTCATGGCTG CGGCTCGGGC ATGGCGGATG TTTCTGGTGG GCAAGGTGCT CAACCGCAAG CTGGTCTGGG ACAAGACCAT GCACGACTTC CCGTCTTCCG ACCTGATTGC CGTCGCGCCC CGCCGTCTGG GCAGCGTGCT GTTGTCCTGG CAAGCCATCA ACGACGAAAA ACTGCAGACC GCACTGACTG AACAGCAAAC CCGTCAGGTG CCCCTGGGCA GGATTTTGCT TAGCCACGGC TGGCTCGACG ATGAAACCCT GGCTGAGGCC ATCGCCTTCC AGAATGACCT GCCGCGGGTG TTCGACATCG CCAGCAAGCG TGCCGACAAC AGTGTGCTGG CGGATGAGTT CTGCCTGCGC TGGCGTGTCG TGCCGTTGCA AATGAATGCG CTGGGCCGCC AGGAAATCGC AGTGGCCAGC CCGCTGCCGC CTGACGGTCT GCAGCAGATT AGCGAACAGC TGGGTGCCGA GCCGGTGCAG TTGATTGCCC GTGAAAGCGA CATCGTCGCG CAGTTGCGTC AGCTTCAGGT GGTCGAGGGT CAGCCGCTTC CAGCCAGAGC GCCACTGCTG GGCGATCTGC TGATCGAGCA AGGCCTGCTG GACCGCGAAG TGTTCCAGAA AGCCATGCTC GGCTACCGCC CGCATGTGCA TGGCCGGATC GGCGACTACC TGGTCGACAT TGGCGTGCTG CCCAGAGAAA CCATCGAACA GGCTGTGGCA CGTCAGCACA ACCATTACCG ATCTGACGAT CAAACGGAGC AGCCACTATG A
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Protein sequence | MTSLYWPYWL AHYYSVLEVA TIVVGLIILV SSIDDLFIDI WYWSRRLYRK FTAERRYRPL TAEQLTARDE QPLAIMVPAW LEYDVIAPMI ENMVSTLDYQ NYVVFVGTYI NDQRTIDEVE RMRRRYKQLH RVEVPHAGPT CKADCLNWVI QAIFLYEKTH AVQFAGTILH DSEDVLHPLE LRLFNYLLPR KDMIQLPVVS LERNWYEWVA GTYMDEFAEW HGKDLVVRES MTDTVPSAGV GTCFSRRALM VLADENQNQP FNTESLTEDY DVGARLAKYG MQAIFVRFPV QFRVLRKSWF RKPYESTLEM PLCVREFFPD TFRTAFRQKA RWTLGIGLQG WEQMGWTGSL ANRYLLFRDR KGVVTSFISI IAYLILIQLL ALIVLRSSGL WNTSFPTPFE TTGLIQYLLV ANGIALLWRI LHRCYFTTVL YGWQHGLLSI PRMVVGNFVN FMAAARAWRM FLVGKVLNRK LVWDKTMHDF PSSDLIAVAP RRLGSVLLSW QAINDEKLQT ALTEQQTRQV PLGRILLSHG WLDDETLAEA IAFQNDLPRV FDIASKRADN SVLADEFCLR WRVVPLQMNA LGRQEIAVAS PLPPDGLQQI SEQLGAEPVQ LIARESDIVA QLRQLQVVEG QPLPARAPLL GDLLIEQGLL DREVFQKAML GYRPHVHGRI GDYLVDIGVL PRETIEQAVA RQHNHYRSDD QTEQPL
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