Gene Psyr_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1030 
SymbolnfrB 
ID3366524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1161268 
End bp1163388 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content60% 
IMG OID637651373 
Productbacteriophage N4 adsorption protein B 
Protein accessionYP_234124 
Protein GI66044283 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.196607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGC TCTATTGGCC TTACTGGCTG GCCCATTACT ACAGCGTGCT GGAAGTCGCG 
ACGATCGTTG TCGGGCTGAT CATCCTGGTA TCGAGTATCG ATGACCTGTT CATCGATATC
TGGTACTGGT CGCGCCGGCT GTACCGCAAG TTCACCGCCG AACGTCGCTA CCGGCCACTG
ACTGCCGAGC AGTTGACTGC CCGTGACGAG CAGCCGCTGG CAATCATGGT CCCGGCCTGG
CTGGAATACG ACGTCATCGC GCCGATGATC GAAAACATGG TGTCGACGCT CGACTATCAG
AACTACGTGG TGTTCGTCGG CACTTACATC AACGACCAGC GCACCATCGA TGAAGTGGAG
CGCATGCGTC GCCGCTACAA GCAGTTGCAC CGTGTGGAGG TGCCGCACGC CGGCCCGACC
TGCAAGGCCG ACTGCCTGAA CTGGGTGATC CAGGCGATTT TCCTGTACGA GAAGACCCAC
GCCGTACAGT TCGCCGGGAC TATCCTGCAC GACAGCGAAG ACGTGCTGCA CCCGCTTGAA
CTGCGCCTGT TCAATTACCT GTTGCCGCGC AAGGACATGA TCCAGTTGCC GGTCGTGTCG
CTGGAACGCA ACTGGTACGA ATGGGTAGCC GGCACCTACA TGGACGAGTT CGCCGAATGG
CACGGCAAGG ACCTGGTGGT ACGCGAAAGC ATGACTGACA CCGTGCCTTC GGCCGGTGTC
GGCACTTGCT TCTCGCGACG TGCGCTGATG GTGCTGGCGG ATGAAAACCA GAACCAGCCG
TTCAATACCG AAAGCCTGAC CGAGGACTAC GACGTCGGCG CGCGACTGGC GAAGTACGGC
ATGCAGGCGA TCTTCGTACG CTTCCCGGTG CAATTTCGGG TGCTGCGCAA ATCGTGGTTC
CGCAAGCCTT ACGAATCGAC GCTGGAAATG CCGCTGTGCG TGCGCGAATT CTTCCCGGAC
ACCTTCCGCA CTGCCTTTCG CCAGAAAGCG CGCTGGACGC TGGGTATCGG CTTGCAAGGC
TGGGAGCAAA TGGGCTGGAC CGGCTCGCTG GCAAACCGTT ACCTGCTGTT TCGCGACCGC
AAGGGTGTGG TGACATCGTT TATCAGCATC ATTGCCTACC TGATCCTCAT CCAGCTGCTG
GCACTGATCG TTCTGCGCTC CAGCGGGCTG TGGAATACCA GCTTCCCGAC ACCGTTTGAA
ACCACCGGAC TGATTCAGTA TCTGCTGGTG GCCAACGGCA TCGCACTGCT GTGGCGGATC
CTGCATCGCT GCTACTTCAC CACCGTGCTT TACGGCTGGC AGCACGGTTT GCTGTCGATA
CCGCGCATGG TGGTCGGCAA CTTCGTCAAC TTCATGGCTG CGGCTCGGGC ATGGCGGATG
TTTCTGGTGG GCAAGGTGCT CAACCGCAAG CTGGTCTGGG ACAAGACCAT GCACGACTTC
CCGTCTTCCG ACCTGATTGC CGTCGCGCCC CGCCGTCTGG GCAGCGTGCT GTTGTCCTGG
CAAGCCATCA ACGACGAAAA ACTGCAGACC GCACTGACTG AACAGCAAAC CCGTCAGGTG
CCCCTGGGCA GGATTTTGCT TAGCCACGGC TGGCTCGACG ATGAAACCCT GGCTGAGGCC
ATCGCCTTCC AGAATGACCT GCCGCGGGTG TTCGACATCG CCAGCAAGCG TGCCGACAAC
AGTGTGCTGG CGGATGAGTT CTGCCTGCGC TGGCGTGTCG TGCCGTTGCA AATGAATGCG
CTGGGCCGCC AGGAAATCGC AGTGGCCAGC CCGCTGCCGC CTGACGGTCT GCAGCAGATT
AGCGAACAGC TGGGTGCCGA GCCGGTGCAG TTGATTGCCC GTGAAAGCGA CATCGTCGCG
CAGTTGCGTC AGCTTCAGGT GGTCGAGGGT CAGCCGCTTC CAGCCAGAGC GCCACTGCTG
GGCGATCTGC TGATCGAGCA AGGCCTGCTG GACCGCGAAG TGTTCCAGAA AGCCATGCTC
GGCTACCGCC CGCATGTGCA TGGCCGGATC GGCGACTACC TGGTCGACAT TGGCGTGCTG
CCCAGAGAAA CCATCGAACA GGCTGTGGCA CGTCAGCACA ACCATTACCG ATCTGACGAT
CAAACGGAGC AGCCACTATG A
 
Protein sequence
MTSLYWPYWL AHYYSVLEVA TIVVGLIILV SSIDDLFIDI WYWSRRLYRK FTAERRYRPL 
TAEQLTARDE QPLAIMVPAW LEYDVIAPMI ENMVSTLDYQ NYVVFVGTYI NDQRTIDEVE
RMRRRYKQLH RVEVPHAGPT CKADCLNWVI QAIFLYEKTH AVQFAGTILH DSEDVLHPLE
LRLFNYLLPR KDMIQLPVVS LERNWYEWVA GTYMDEFAEW HGKDLVVRES MTDTVPSAGV
GTCFSRRALM VLADENQNQP FNTESLTEDY DVGARLAKYG MQAIFVRFPV QFRVLRKSWF
RKPYESTLEM PLCVREFFPD TFRTAFRQKA RWTLGIGLQG WEQMGWTGSL ANRYLLFRDR
KGVVTSFISI IAYLILIQLL ALIVLRSSGL WNTSFPTPFE TTGLIQYLLV ANGIALLWRI
LHRCYFTTVL YGWQHGLLSI PRMVVGNFVN FMAAARAWRM FLVGKVLNRK LVWDKTMHDF
PSSDLIAVAP RRLGSVLLSW QAINDEKLQT ALTEQQTRQV PLGRILLSHG WLDDETLAEA
IAFQNDLPRV FDIASKRADN SVLADEFCLR WRVVPLQMNA LGRQEIAVAS PLPPDGLQQI
SEQLGAEPVQ LIARESDIVA QLRQLQVVEG QPLPARAPLL GDLLIEQGLL DREVFQKAML
GYRPHVHGRI GDYLVDIGVL PRETIEQAVA RQHNHYRSDD QTEQPL