Gene Psyr_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1016 
Symbol 
ID3366510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1149858 
End bp1150820 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content63% 
IMG OID637651359 
Productthioredoxin reductase 
Protein accessionYP_234110 
Protein GI66044269 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID[TIGR01292] thioredoxin-disulfide reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACG TACGTCATTC CCGAGTGATC ATTCTCGGTT CCGGCCCTGC CGGTTACAGC 
GCTGCGGTCT ACGCCGCTCG CGCCAACCTC AAGCCCCTGC TGATCACCGG CATGCAGGCT
GGCGGCCAAT TGACCACGAC TACAGAAGTT GATAACTGGC CAGGCGACCC GCACGGCCTG
ACCGGTCCTG CCCTGATGGA ACGCATGCGT GAGCATGCCG AGCGTTTCGA GACTGAAATC
GTCTTCGACC ACATCAATTC GGTTGATCTG GCCGGCAAGC CGTTCAGCCT GCAGGGCGAT
AGCGCGACCT ACACCTGCGA CGCCCTGATC ATTGCCACCG GCGCCAGCGC CCGCTACCTG
GGCCTGCCTT CAGAAGAAGC GTTCATGGGC AAGGGTGTTT CTGCCTGCGC CACCTGCGAC
GGTTTCTTCT ATCGCAACCG TGAAGTCGCG GTGGTCGGTG GGGGTAACAC CGCGGTGGAA
GAGGCGCTGT ATCTGGCCAA CATCGCCAGC AAGGTGACCC TGGTTCACCG TCGCGAAACC
TTCCGTGCCG AGAAGATCCT GATCGACAAG CTGCACGCGC GTGTCGCCGA GGGCAAGATC
GAACTCAAGC TCAACGCCAC GCTGGACGAG GTCCTGGGTG ACAACATGGG CGTGACCGGT
GCGCGCCTGA AGAACAACGA CGGCAGCAGC AGCGAGCTGA AAGTCGACGG CGTGTTCATC
GCGATCGGCC ACACGCCGAA CACCTCGTTG TTCGACGGCC AGCTGGCCTT GAAGGACGGT
TACATGGTTG TGCAGGGTGG CCGTGAAGGC AACGCCACAG CGACCAGCGT CGAAGGCGTA
TTCGCGGCCG GCGACGTGGC CGACCACGTG TATCGCCAGG CCATTACCTC GGCCGGTGCC
GGCTGCATGG CGGCACTCGA TGTCGAGCGC TACCTGGACG GGCTGGCTGA CGTATCGTTC
TGA
 
Protein sequence
MSDVRHSRVI ILGSGPAGYS AAVYAARANL KPLLITGMQA GGQLTTTTEV DNWPGDPHGL 
TGPALMERMR EHAERFETEI VFDHINSVDL AGKPFSLQGD SATYTCDALI IATGASARYL
GLPSEEAFMG KGVSACATCD GFFYRNREVA VVGGGNTAVE EALYLANIAS KVTLVHRRET
FRAEKILIDK LHARVAEGKI ELKLNATLDE VLGDNMGVTG ARLKNNDGSS SELKVDGVFI
AIGHTPNTSL FDGQLALKDG YMVVQGGREG NATATSVEGV FAAGDVADHV YRQAITSAGA
GCMAALDVER YLDGLADVSF