| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1010 |
|---|
| Symbol | |
|---|
| ID | 3366504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1144436 |
|---|
| End bp | 1144924 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637651353 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_234104 |
|---|
| Protein GI | 66044263 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCTT TTCACGACAT CAAATTGAAA GCGCTGGGTG GCCAGGAACT GCCGCTGGCG
AATTTCAGAA AAAAAGTGGT TCTGGTAGTC AACGTCGCGT CCAAATGCGG GCTGACACCG
CAGTACGCGG CACTTGAAAA CCTCTATCAG CAGTACAAGG ACCAGGGCCT GGAGATACTG
GGTCTGCCGT GCAACCAGTT TGCCGGGCAG GAACCGGGTA CCGAGCAAGA GATCGCCGAA
TTTTGCCAAC TCAACTATGG CGTGACGTTT ACGCTGGGTG AAAAACTCGA CGTCAACGGC
CCCAACCGGC ACTCGCTTTA CCGTTTGCTG GCGGGCGAGG GTGCCGAGTT TCCCGGGGAT
ATCACCTGGA ACTTCGAAAA GTTTCTGGTT GGCAAGAACG GCGGTGTAAG CGCACGTTTT
TCTCCGCGTA CTACTCCGGA TGATCCTGCG GTGATCCAGG CCATCGAAAA GGCCCTGGCG
CAAAGCTGA
|
|---|
| Protein sequence | MSAFHDIKLK ALGGQELPLA NFRKKVVLVV NVASKCGLTP QYAALENLYQ QYKDQGLEIL
GLPCNQFAGQ EPGTEQEIAE FCQLNYGVTF TLGEKLDVNG PNRHSLYRLL AGEGAEFPGD
ITWNFEKFLV GKNGGVSARF SPRTTPDDPA VIQAIEKALA QS
|
|---|
| |