Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0998 |
Symbol | |
ID | 3366492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1131651 |
End bp | 1132388 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651341 |
Product | isochorismatase hydrolase |
Protein accession | YP_234092 |
Protein GI | 66044251 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | [TIGR03614] pyrimidine utilization protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCC CGACAACCGT CGCAGGCGTT GACCTGCCGG ACCTGCAGCC CGCCCGCGAG CTGCCCGCCC GTCCCGAGCC GCTGCGCATG AAACCCGGCG AAACCGCGCT GGTGGTGGTC GACATGCAGA ACGCCTACGC CTCGCTCGGT GGGTATCTGG ACCTGGCCGG GTTCGATGTC AGCAGCACCG GGCCGGTCAT CGCCAATATC AACAAGGCCT GTGCCGCCGC GCGTGCAGCA GGCATTCCGG TGATCTTTTT CCAGAATGGC TGGGACCCGG CCTATGTCGA AGCCGGTGGC CCCGGTTCAC CGAACTGGCA CAAGTCCAAC GCCCTGAAAA CCATGCGCAA GCGCCCGGAA CTCGAAGGGC AACTGCTGGC CAAGGGCGGT TGGGATTACC AGCTGGTCGA CGAACTGACG CCACAGCCTG GCGACATCGT GGTGCCGAAA ATCCGCTACA GCGGCTTCTT CAACTCCAGT TTCGACAGCG TGCTGCGCAG CCGCGGCATT CGCAATCTGG TGTTCACCGG CATCGCCACC AATGTCTGTG TCGAGTCGAC CCTGCGCGAC GGCTTTCACC TGGAATATTT CGGCGTGGTG CTGGCTGACG CGACCCATCA GGCAGGCCCC GAATTCGCTC AGCAAGCCGC GCTGTTCAAC ATCGAAACCT TCTTTGGCTG GGTTTCCAGC GTCGATGACT TCTGCACCAC TTTCAGCCCT GTCGGGCAAC CTTCGTGA
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Protein sequence | MTTPTTVAGV DLPDLQPARE LPARPEPLRM KPGETALVVV DMQNAYASLG GYLDLAGFDV SSTGPVIANI NKACAAARAA GIPVIFFQNG WDPAYVEAGG PGSPNWHKSN ALKTMRKRPE LEGQLLAKGG WDYQLVDELT PQPGDIVVPK IRYSGFFNSS FDSVLRSRGI RNLVFTGIAT NVCVESTLRD GFHLEYFGVV LADATHQAGP EFAQQAALFN IETFFGWVSS VDDFCTTFSP VGQPS
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