| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0985 |
|---|
| Symbol | |
|---|
| ID | 3366479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1115643 |
|---|
| End bp | 1116227 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637651328 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234079 |
|---|
| Protein GI | 66044238 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2119] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.172763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAT CATTCTTAGT CCCTACCGCA GTGGTCGCGC TCGCCGAAAT CGGTGACAAG
ACGCAGTTGC TCGCGCTCGT TCTCGCCGCG CGCTTTCGCA AGCCATGGCC GATCATTGCC
GGCATCGTTG CCGCAACCCT CGCCAACCAT GCAGCCGCCG GCGCAGTGGG TGCGTGGTTC
AGCAGTTATC TGTCAGACGC AGTGCTGCAC TGGATCCTCG CCGCCAGCTT TACCGCCACG
GCGCTGTGGA CACTGGTTCC GGACAAGATG GACGACGACG AAGCCAGCAC GGCACGCAAG
TTCGGCCCGT TCATGACCAC GCTGATCACG TTCTTCATCG CTGAAATCGG TGACAAGACG
CAGATCGCCA CGGTGATGCT GGCGGCGCAG TATTCCTATC TGTGGCTGGT CATTCTGGGC
ACCACGGTGG GCATGCTGCT GGCCAACGTG CCGGTGGTGC TGGCGGGCAA TTTCGCCGCC
GAGAAGCTGC CGCTGACCCT GATCCGCCGA CTGGCTGCCT GCGCGTTCTT CGTGCTGGCG
CTGGTGGCGG TTTACAAGGC AATGCAGGTC AGCGGCTGGG TGTAA
|
|---|
| Protein sequence | MLESFLVPTA VVALAEIGDK TQLLALVLAA RFRKPWPIIA GIVAATLANH AAAGAVGAWF
SSYLSDAVLH WILAASFTAT ALWTLVPDKM DDDEASTARK FGPFMTTLIT FFIAEIGDKT
QIATVMLAAQ YSYLWLVILG TTVGMLLANV PVVLAGNFAA EKLPLTLIRR LAACAFFVLA
LVAVYKAMQV SGWV
|
|---|
| |