Gene Psyr_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0968 
Symbol 
ID3366462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1101699 
End bp1102976 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content61% 
IMG OID637651311 
Productxanthine/uracil permease family protein 
Protein accessionYP_234062 
Protein GI66044221 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC AGGAGTTCAA CGATCCACTG TGGCGCACGA TTTTATCCGG CGCGCAAATG 
CTCTTCGTGG CCTTTGGCGC GCTGGTGCTG ATGCCGCTGA TCACCGGGCT CGATCCGAAC
GTGGCGCTGT TCACCGCAGG CCTGGGCACG CTGCTGTTCC AGATCGTCAC CGGGCGTCAG
GTGCCGGTCT TTCTGGCCTC GAGCTTTGCC TTCATCACCC CGATCATCCT CGCCAAGGGC
CAGTTCGGTC TGGCCGCGAC CATGGGCGGC GTCATGGCGG CAGGCTTTGT GTATACCTTT
CTCGGTCTGG CGGTGAAGAT CAAGGGCACC GGTTTCATTG ATCGCCTGCT GCCTCCCGTG
GTGATCGGGC CGGTCATCAT CTCCATCGGC CTGGCCATGG CCCCGATTGC AGCCAACATG
GCGATGGGCA AGTCCGGCGA TGGCGTGCAG TTGATTCCTT ATCAGACCGC CATGCTGATT
TCGATGCCCG CCTTGCTGAC CACGCTGATC GTGGCGGTGT TCGGCAAAGG CATTTTCCGT
CTGGTGCCGA TCATCTCCGG CGTGCTGGTG GGCTTCGCGC TGTCGTTCTA CTTTGGTGTG
GTCGATACCA AAAAAATCGC TGACGCCGCC TGGCTGGCCT TGCCGCACTT CACTGCACCG
GAATTCAACT GGCAGGCGAT TCTGTTCATT GTTCCGGTGG CCCTGGCCCC GGCCATCGAG
CACATCGGCG GCGTGATTGC AGTCGGCAGT GTGACCGGAC GCGATTACCT GAAAAAGCCG
GGCCTGCACC GCACGCTGTT CGGCGACGGC ATCGCTACCA CCGCTGCCGG TCTGTTCGGC
GGCCCGCCCA ATACCACCTA CGCCGAAGTG ACGGGCGCGG TGATGCTGAC CAAGAACTAC
AACCCGCAGA TCATGATCTG GGCATCGTTC TTTGCCATCA CGCTGGCGTT CATTGGCAAG
TTCGGCGCGT TGCTGCAGAG CATTCCGGTG CCGGTAATGG GCGGCATTCT GTGCCTGCTG
TTCGGTTCGA TTGCTGCGGT GGGCATGAAC ACCCTGATCC GCCACAAGAT CGACCTGGCC
GAAGCGCGCA ATCTGGTGAT CGTCTCGGTC ACCCTGGTAT TCGGGATCGG CGGCGTATTG
ATCGGCACCG GCAACGGCCC GAACGATTTC GGCCTGAAGG GCATCGCCCT GTGCGCCGTG
ACCGCCATCG CCCTGAACCT GATCCTGCCG GGCAATGACA GCTGGAAGAA CAAGCAACTG
GATGATCAGT TGCCGTAA
 
Protein sequence
MTQQEFNDPL WRTILSGAQM LFVAFGALVL MPLITGLDPN VALFTAGLGT LLFQIVTGRQ 
VPVFLASSFA FITPIILAKG QFGLAATMGG VMAAGFVYTF LGLAVKIKGT GFIDRLLPPV
VIGPVIISIG LAMAPIAANM AMGKSGDGVQ LIPYQTAMLI SMPALLTTLI VAVFGKGIFR
LVPIISGVLV GFALSFYFGV VDTKKIADAA WLALPHFTAP EFNWQAILFI VPVALAPAIE
HIGGVIAVGS VTGRDYLKKP GLHRTLFGDG IATTAAGLFG GPPNTTYAEV TGAVMLTKNY
NPQIMIWASF FAITLAFIGK FGALLQSIPV PVMGGILCLL FGSIAAVGMN TLIRHKIDLA
EARNLVIVSV TLVFGIGGVL IGTGNGPNDF GLKGIALCAV TAIALNLILP GNDSWKNKQL
DDQLP