Gene Psyr_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0950 
Symbol 
ID3366444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1085984 
End bp1086817 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content64% 
IMG OID637651293 
Productmodification methylase HemK 
Protein accessionYP_234044 
Protein GI66044203 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA TCGCAAGTGT ACTCAGAAGC GCCGAGCTTC CCGATTCACC GACTGCACGG 
CTTGATGCCG AGCTTCTGCT GGCGGCGGCG CTGGGCAAAC CACGCAGTTT TCTGCACACC
TGGCCCGAGC GCATCGTCAG CACCGAAGCC GCCGTGGCAT TCGCCGGCTA CATGGAGCGC
CGCCGCAAGG GCGAGCCGGT CGCTTACATT CTCGGCCAGC AGGGCTTCTG GAAGCTGGAT
CTGGAAGTCG CCCCGCACAC GTTGATCCCG CGCCCCGAAA CCGAAATGCT GGTCGAGGCG
GCACTGGAAC TGGTGCCTGC CTTCGCACCC GCTCAGGTGC TGGACCTCGG CACCGGCACC
GGCGCAATTG CGCTGGCGCT GGCCAACGAC CGCCAGCAAT GGAAGGTTAC TGCGGTTGAC
CGTGTGCCAG AGGCCGTCGC GCTGGCAGAG CGCAACCGGC AGCGCTTGCA ACTGAACAAC
GCCGAAGTCT TCGAAAGCCA CTGGTTCAGT GGCCTGCAAG GTCGACAGTT CGACCTGATC
ATCAGCAACC CGCCGTACAT CTCTGACGCA GATCCGCATC TGTCGGCTGG CGACGTGCGT
TTTGAGCCGA GCAGTGCGCT GGTGGCCGGT TCCGACGGGC TGGATGACTT GCGCACGATC
ATCGAACAGG CGCCTGCACA TCTCAATGCG GATGGCTGGC TGCTGCTGGA GCACGGCTAC
GATCAGGGAC CTGCGGTGCG TGAGCTGCTG ATTCGCCAGG GCTTCGAGCG TATCCAGACG
CGTCGTGATC TGGGCGAGCA TGAGCGCATC ACGTTCGGAT GCAAGCCGTG CTGA
 
Protein sequence
MTIIASVLRS AELPDSPTAR LDAELLLAAA LGKPRSFLHT WPERIVSTEA AVAFAGYMER 
RRKGEPVAYI LGQQGFWKLD LEVAPHTLIP RPETEMLVEA ALELVPAFAP AQVLDLGTGT
GAIALALAND RQQWKVTAVD RVPEAVALAE RNRQRLQLNN AEVFESHWFS GLQGRQFDLI
ISNPPYISDA DPHLSAGDVR FEPSSALVAG SDGLDDLRTI IEQAPAHLNA DGWLLLEHGY
DQGPAVRELL IRQGFERIQT RRDLGEHERI TFGCKPC