| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0947 |
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| Symbol | |
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| ID | 3366441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1081673 |
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| End bp | 1083343 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651290 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_234041 |
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| Protein GI | 66044200 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCCG CCTCGTCACA GCCTGTGCCC GCTCAAAAGG ACGCCCCGCC CGCGCCTGAA
GCCAAGCCGC AGGTCTATGG CTCGTTCACT CAGGACACCC TGGTCAGCCT GTTGAGTGCG
GAGCTGGCTG GCCAGCGCAA CCGCTTTGAC ATCGCCCTGG ACAACTATGT GACCCAGGCG
ATCAAGACTC AGGACCCGGG GGTCTCGGAG CGCGCTTATC AGATCGCCGA GTACATGGGT
GCCGATCAAT CGGCGCTGGA TACCGCACTG ATCTGGGCGA GGAACGCGCC GGGAAATCTT
GAAGCGCAAC GAGCTGCCGC CATTCAACTG GCGCGCGCCG GGCGTTACGA CGATTCCCTT
GTGTACATGG AGAGAGTCCT GCAAGGCCAG GGCGACACGC ACTTCGATTT TCTGGCCCTG
TCGGCGGCCG AAACAGATCC GGATACCCGC AATGGTCTGC TCAAGAGCTT TGACCGACTG
CTGGGCAAAT ACCCGAACAA CGGCCAGCTG ATTTTCGGCA AGGCGCTGTT GCTGCAGCAG
AACGGCGATT CCGAACAATC GCTGAAACTG CTTGAAGACA ACCCGCCGAA AGAAGGTGAA
ATCGCGCCGA TCCTGCTGCA CGCCCGCCTG CTGCAAAGCA TGAATCGAGG CAAGGAAGCG
GTGCCCCTGC TGGAAAAAAG CATCAAGAAA TACCCCGACG ACAAGCGCCT GCGCCTGACC
TATGCGCGCA TGCTCGTCGA GCAGAACCGC ATGGAAGATG CCAAAGTGCA GTTTTCCGCA
CTCTTGCAGC AGTATCCGGA TGACGACGAG CTGCGCTTTT CGCTGGCCCT GGTGTGCCTT
GAAGCCAAGG CCTGGGACGA AGCAGCGGGC TATCTGGAAG AGCTGATCGC CCGTGGCGCG
CATGTCGATT CGGCGCATTT GAATCTGGGC CGCATCCACG AAGAGCGCGA TGACCCGCAA
AGCGCGCTCA ACGAATACGC TCAGGTCGGT CCCGGCCCGG ACTTCCTGGC GGCGCAATTG
CGCCAGGCCG ATATTCTGCT CAGCAACGGT AACGGTGCCG AAGCCGCCAA ACGGCTGTCC
GAAGCGCGCG CCGAAGAGCC CGATTATGCA ATCCAGCTGT ACCTGATCGA AGCCGAAACC
CTGACCAGCA ATGATCAACT GGACCGTGGC TGGCAGGTGC TGAATCAGGC GCTCAAGCAA
TACCCGGACG ACGCCAACCT GCTGTACACC CGCGCCATGC TGGCTGAAAA ACGCAATGAT
CTGGCGCAGA TGGAAAAAGA CCTGCGCACC ATCATCAAGC GCGAACCGGA AAACGCCATG
GCGCTGAATG CACTGGGCTA CACCCTTTCC GATCGCACGA CGCGTTATAG CGAGGCACGC
GACCTGATCG AAAAAGCCCA CAAGATCAGC CCCGACGATC CGGCAGTGCT CGACAGCCTT
GGCTGGGTGA ACTACCGCCT GGGCAATCTG GACGATGCCG AGCGCTACCT GCGTCAGGCA
CTCGAACGCT TCCCCGACCA CGAAGTGGCC GCCCACCTGG GCGAAGTACT CTGGGCCAAG
GGCGAGCAGC GCGAAGCCAA AAAAGTCTGG GCCAAGGCCC TTGAACAACA ACCCGACAGC
ACCGTCCTGC GCAGCACATT GCGACGCTTG ACCGGATCAG AGACCCTTTG A
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| Protein sequence | MTPASSQPVP AQKDAPPAPE AKPQVYGSFT QDTLVSLLSA ELAGQRNRFD IALDNYVTQA
IKTQDPGVSE RAYQIAEYMG ADQSALDTAL IWARNAPGNL EAQRAAAIQL ARAGRYDDSL
VYMERVLQGQ GDTHFDFLAL SAAETDPDTR NGLLKSFDRL LGKYPNNGQL IFGKALLLQQ
NGDSEQSLKL LEDNPPKEGE IAPILLHARL LQSMNRGKEA VPLLEKSIKK YPDDKRLRLT
YARMLVEQNR MEDAKVQFSA LLQQYPDDDE LRFSLALVCL EAKAWDEAAG YLEELIARGA
HVDSAHLNLG RIHEERDDPQ SALNEYAQVG PGPDFLAAQL RQADILLSNG NGAEAAKRLS
EARAEEPDYA IQLYLIEAET LTSNDQLDRG WQVLNQALKQ YPDDANLLYT RAMLAEKRND
LAQMEKDLRT IIKREPENAM ALNALGYTLS DRTTRYSEAR DLIEKAHKIS PDDPAVLDSL
GWVNYRLGNL DDAERYLRQA LERFPDHEVA AHLGEVLWAK GEQREAKKVW AKALEQQPDS
TVLRSTLRRL TGSETL
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