Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0946 |
Symbol | lolB |
ID | 3366440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1081051 |
End bp | 1081668 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651289 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_234040 |
Protein GI | 66044199 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.562833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTGC GCCACGTAAT CGTATTCAGC CTCATCGCCC TGCTCACCGG CTGCGCCGGC CTCACCTCCC GCGAAGCCGT TCAGGGCAAG GGTGACCCCG CGCAATGGCG CGAGCACAAA CAGCAACTGA GCAGCCTCGA TGGCTGGCAG ATCAACGGCA AGGTCGGTAT CCGCGCGCCG AAAGACTCCG GCAGCGGCAC CCTGTTCTGG CTGCAGCGCC AGGATTACTA CGACATCCGC CTGTCCGGCC CGCTAGGTCG TGGTGCTGCA CGCCTGACCG GCAGGCCCGG CGCCGTGGTG CTCGAAGTTG CCAATCAGGG CCGCTACGAA GCCACCTCGC CAGAATCACT GCTGCAGGAT CAACTGGGCT GGAAACTGCC CGTGTCGCAC CTTGTATGGT GGGTACGCGG TCTACCGGCA CCGGACAGCA AAAGCAACGT GACACTCGAT GGCGACAGCC GACTGGCCAG CCTTGAACAG GATGGCTGGC AGGTGGAATA CCTCAGCTAC GTCGAGCAGA ACGGCTATTG GCTGCCAGAG CGCGTCAAGC TGCACGGGCA GGATCTGGAT GTCACGCTGG TCATCAAGGA CTGGCAGCCT CGCAAACTGG GGCAATGA
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Protein sequence | MFLRHVIVFS LIALLTGCAG LTSREAVQGK GDPAQWREHK QQLSSLDGWQ INGKVGIRAP KDSGSGTLFW LQRQDYYDIR LSGPLGRGAA RLTGRPGAVV LEVANQGRYE ATSPESLLQD QLGWKLPVSH LVWWVRGLPA PDSKSNVTLD GDSRLASLEQ DGWQVEYLSY VEQNGYWLPE RVKLHGQDLD VTLVIKDWQP RKLGQ
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