| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0943 |
|---|
| Symbol | |
|---|
| ID | 3366436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1078362 |
|---|
| End bp | 1078976 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637651285 |
|---|
| Product | 50S ribosomal protein L25/general stress protein Ctc |
|---|
| Protein accession | YP_234037 |
|---|
| Protein GI | 66044196 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
|---|
| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.293242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAT TTACCCTGAA TGCAGAACAG CGTTCCGACC TGGGGAAAGG TGCGAGCCGC
CGCCTGCGTC GTCTCGCTAG CCTGGTTCCA GCTGTCGTCT ACGGTGGCGA CAAAGCCCCC
GAGTCCATCA GCATGCTGGC CAAGGAAGTT GCCAAACTGC TGGAAAACGA TGCGGCCTAC
AGCCACATCA TCGAGCTGAA CGTTGGTGGC AAGAAGCAAA ACGTCATCAT CAAGGCGCTG
CAACGTCACC CGGCCAAAGG CCACGTGATG CACGCTGACT TCGTGCGCGT TATTGCCGGC
CAGAAACTGA CCGCAATCGT GCCGATCCAC TTCCTGAACG AAGAAGCTCC GGTCAAGAAA
GGCGGCGAGA TCTCGCACAC TACCACTGAA CTGGAAGTGA CCTGCCTGCC GAAAGACCTG
CCTGAGTTCA TCGAAGTCGA TCTGGGCTCG CTGGAAGTAG GTGACAACGT TCACCTGTCC
GAACTGAAAG CCCCTAAAGG CGTTGAGTTC GTCGCTTTGG CACACGGTAC TGACCTGGCA
ATCGCCAACG TCCACGCACC GCGTATCGTC AAAGACGAAG AAGAAGGTGA AGCTGAAGAA
GGCGCTGCCG AGTAA
|
|---|
| Protein sequence | MNEFTLNAEQ RSDLGKGASR RLRRLASLVP AVVYGGDKAP ESISMLAKEV AKLLENDAAY
SHIIELNVGG KKQNVIIKAL QRHPAKGHVM HADFVRVIAG QKLTAIVPIH FLNEEAPVKK
GGEISHTTTE LEVTCLPKDL PEFIEVDLGS LEVGDNVHLS ELKAPKGVEF VALAHGTDLA
IANVHAPRIV KDEEEGEAEE GAAE
|
|---|
| |