| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0936 |
|---|
| Symbol | |
|---|
| ID | 3366429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1071372 |
|---|
| End bp | 1072520 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637651280 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_234032 |
|---|
| Protein GI | 66044191 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.22828 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAG GCTTGAGTTG TACGGTCTGG GCGAAAGGCG AACGTGCCGG GCATCTGGAC
GGTATCGGCA TATATTCCAG AGCGCTTTGG CACAGCCTGA CCAAGCTGAG TCAGGCTGAC
GATATCCACG TCAAACCTTA CGCTTTCGGC AAGCAACTGC CAGTCCTGGC CTGTGGTCAA
CCGCAACAGT TGTCCAGCGA CTACCGTATT CATGCCATGC TCAGTGGCGT CCTAAAACTG
CCATTGGGTA GCTCAGCAAG CATCGCCAAA GACGTTCAGC TGTTCCATGC CACGGATCAC
CATGTCCCAC GAATCAAAGG CGTACCTGTC GTGGCCACGA TCATGGACAT GATTCCGATA
TTACACCCGG AATGGATCAA GCAAGACCTC AAGCGCCTGA AAAGCTGGCT GTTCACAACC
AGCATTAAAC GTGCCGATCA CATCATCACC ATCTCCGAAT ACAGCAAGCA GGACATGATT
AGCCACCTGG GCATTGCGCC AGAGCGCATC AGCGTCACGC CCCTGGGCGT GGACCCTGTG
TATTTCGAGC GCGTCGGCGC CGCCGAGCGC AACAGGGTGC TGGACACGTA TGGCCTCAAA
CCGGGCTTCT TTCTGGTAGT AGGCACCCTG CAACCCCGCA AGAACCTGCA ACGTGTGCTT
GAAGCCTTCC AGCAACTGCC AGCACTGGTA CGCAAAGAGC ATCCGCTGGT GATTGTCGGC
CGCAACGGCT GGAGTAACGA CGAACTGCTC CCGCAGCTTG AGGCATTGCA GCAACGTGGC
GAAGGTCGCT GGCTGAGTTA TCTGCCACAA AATAAGGTGC TAGCGCTGCT GCAAAGTGCC
GGAGCGCTGG TGTTTGCTTC GCTGTACGAG GGGTTCGGCC TGCCAGCCAT CGAGGCGTTC
GCGGCCCAGT GCCCGCTGAT CGCGTCCAAC AATTCTTCAC TGCCGGAAGT GACAGGCGAT
GCCGCCTGGG CTGTCGACCC GCACAGTGCA GAAAGCATCA GCACTGCAAT GCTCGCCGTC
CTGGAACAGC CTGAAGAACG TGAGCGCAAG GTTCAGTCAG GGCTGGGGCG TGCGCGTCAT
TTCAGTTGGG ATGCCTGTGC GCAGAGCACG CTGGATATCT ACCGCAAGGT GCTGGCGACT
CATCGCTAG
|
|---|
| Protein sequence | MDIGLSCTVW AKGERAGHLD GIGIYSRALW HSLTKLSQAD DIHVKPYAFG KQLPVLACGQ
PQQLSSDYRI HAMLSGVLKL PLGSSASIAK DVQLFHATDH HVPRIKGVPV VATIMDMIPI
LHPEWIKQDL KRLKSWLFTT SIKRADHIIT ISEYSKQDMI SHLGIAPERI SVTPLGVDPV
YFERVGAAER NRVLDTYGLK PGFFLVVGTL QPRKNLQRVL EAFQQLPALV RKEHPLVIVG
RNGWSNDELL PQLEALQQRG EGRWLSYLPQ NKVLALLQSA GALVFASLYE GFGLPAIEAF
AAQCPLIASN NSSLPEVTGD AAWAVDPHSA ESISTAMLAV LEQPEERERK VQSGLGRARH
FSWDACAQST LDIYRKVLAT HR
|
|---|
| |