Gene Psyr_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0920 
Symbol 
ID3366413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1045977 
End bp1048472 
Gene Length2496 bp 
Protein Length831 aa 
Translation table11 
GC content53% 
IMG OID637651264 
Productglycosyl transferase, group 1 
Protein accessionYP_234016 
Protein GI66044175 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTG TCATTGATCT ACAGGGCGCT CAGTCCGAAA GTCGTTTTCG CGGTATTGGT 
CGCTATTCTC TGTCATTGGC TCAGGCCATC GCACGAAATG CCGGGAGCCA TGAGATATGG
CTAGCCCTGA ACAACTGCAT GTCGGAAAGC ATTCCTGACA TAAGGGCTGC CTTTGCTGGT
CTTATTCCTG AGAGCCGCAT ACGTATATTT GACGTGCCGG GTGATGCGAA CCCGACTCCT
TGGGTGGCGA GAGCATCTGA AGTCATCAGA GAGTCCTTTT TGTCCACGTT GAAACCCGAT
GCGGTAGTGG TCAGCAGTCT GTTTGAAGGC TATTGGGCGA ACGCAGTGAC GTCCGTTGGG
GCTGTGCCGG CAACGCATCA AACCGCAGTA ATCCTCTATG ACCTGATTCC GTTCATGAAC
GAGGATGTCT ATCTTCCTAC TGCAGAGCTG AAAGACTATT ACCACCGTAA AATAGACTGG
TTGAAGAAAG CCGATACTTT GCTGGCCATT TCCGATTCCT CGCGTCAGGA AGCGGTGACT
CACCTAGGCA TTGACCAAGC AAAGATAGCC AATATTTCTG CGGCTATTGG TGAGCAGTTT
ATTCCCGATG ATGTGAATCT GAGCAAGAGT TCGGCGATAC TTGAGCGTCT GGGCGTGAAA
AGCGAGTTCA TTCTTTATGC GCCGGGCGGC TTCGACCCCA GGAAGAATTT CGCTCGCTTG
CTTGAAGCCT ATAGCACGTT GCCCAGCGCG CTTAAGGCCA GGCACCAGTT GGTAATCGCA
AGCAAGCTGC ATGCTCAGCA GCGAATGGAG CTGCTCGCCT TCGCAGAGCA ATATGGCGTC
AAGGCTTCGG AGTTGGTACT GACTGGCTAC GTCAATGATG CAGACCTGAT TGCCCTCTAC
TCTTTGACCA AGCTATTTGT CTTCCCGTCG ACCCATGAAG GCTTTGGTCT TCCGGTGCTG
GAAGCCATGG CATGTGGCGC TGCGGTTATC GGTTCTAACT GCAGCAGTGT TCCGGAAGTC
ATAGGGTTCG ACGAAGCGCT GTTCGACCCG TTCTCGGTCG GCTCCATCGC TGCGAAAATG
CTAGAAGGTC TAGAAAGCGA TGGCTTCCGC TCAAGATTGC TTACCAATGC AGGGGAGCAG
TGCAAGAAGT TTTCGTGGGA TGAGTCTGCG AAAAAAGCCA TAGAAGCTTT GGAGTCGAGG
CATTCGTCGG TTGCTGCTGA TCAGCCTGAC CTGCCTGATC CTGGAGCTGC ATTGCTGGAG
CGACTGATTT CACTCTCGGA CACTGCGCCT ACTGACATCG AGCTTTTTCA GGTTGCGAAA
AGTATCGCAT TCGACTTTGC AGGTGCTGAT CACAGGCAGT TGTTGCTTGA TGTATCCAGC
ATCGTTCACA GTGATGCCAA ATCAGGTATT CAACGCGTCG TACGCAGTCT GCTCCACGAG
TTCTTGAATG ACCAACCAGC AGGCCTGACT GTTCGTCCGA TCTACTTCGC GGATGGCCAG
TATTATTATG CTAATGCCTT TGCCTCCCGC ATCTATGATC AGTTTTCCGA AACGACAGAT
GCAATTATCG ACTTCGCCCA AGACGACATC TATCTGTCTC TGGACTTGAA CATGCACTTG
GCCAGTCAGC TCTATCCGCT GCACAGTCAG ATGCGGCAGA TGGGCGTACA GGTCAGTTAC
ATCGTGTACG ACTTGCTGCT GTTCCACCGC CCTGACTGGT GGGTGGCGCC GAATGCTGAG
CTGTTCAACG ACTGGCTGCA GAAAATCAGC ATGGTCGCCA GTAGCCTGAT TTGCATATCG
GGTGCAGTTG CGGATGAATT GAAGCAGTGG CTTGCTGACA ATGTGGACAA GTGCGCAGGC
AACAAGCCAA GTGTAAAAAG CTTCCACTTG GGGGCCGATA TCGATAACAG CCTGCCTTCT
GCGGGTCTGC CCGATGATGC AGGGGAGCTG TTGGCACGTC TGGCGCAGAA GCCAAGCTTC
CTGATGGTCA GTACCGTAGA GCCGCGCAAA GGGCATGCGC AAACGCTCTC TGCTTTTGAA
AGTCTCTGGG AGCAGGGGCA GGACATTAAT CTTGTCATCG TCGGGAAACG GGGCTGGCTT
GTGGACGAGC TGGTCGCACG CCTTGAAAAC CATCCCGAGA AAGGCAACAG GCTTTTCTGG
CTGGAAGGCA TCAGTGATGA GTACCTCGAA AAGATTTACT CGGCATCTAC CTGCTTGATC
GCAGCATCCG AGGGCGAGGG GTTTGGCTTG CCACTGATTG AAGCTGCTCA GTACGGGCTG
CCGATGATCG TTCGTGATCT GCCGGTTTTC AGAGAGATCG CACTTGATCA TGCGTTCTAC
TTTAGCGGTA TGAACGATTC TGATATCAGC GCCGCGATCA CGGCGTGGCT TGACCTTCAC
AAAGACGACA AGCATCCGGG CTCCGGTGAC ATGCCTTGGC TGACTTGGGA GCAAAGTGCT
GCGCAACTGA AAAAAGCACT GATGTTCAGC GTTTAG
 
Protein sequence
MRIVIDLQGA QSESRFRGIG RYSLSLAQAI ARNAGSHEIW LALNNCMSES IPDIRAAFAG 
LIPESRIRIF DVPGDANPTP WVARASEVIR ESFLSTLKPD AVVVSSLFEG YWANAVTSVG
AVPATHQTAV ILYDLIPFMN EDVYLPTAEL KDYYHRKIDW LKKADTLLAI SDSSRQEAVT
HLGIDQAKIA NISAAIGEQF IPDDVNLSKS SAILERLGVK SEFILYAPGG FDPRKNFARL
LEAYSTLPSA LKARHQLVIA SKLHAQQRME LLAFAEQYGV KASELVLTGY VNDADLIALY
SLTKLFVFPS THEGFGLPVL EAMACGAAVI GSNCSSVPEV IGFDEALFDP FSVGSIAAKM
LEGLESDGFR SRLLTNAGEQ CKKFSWDESA KKAIEALESR HSSVAADQPD LPDPGAALLE
RLISLSDTAP TDIELFQVAK SIAFDFAGAD HRQLLLDVSS IVHSDAKSGI QRVVRSLLHE
FLNDQPAGLT VRPIYFADGQ YYYANAFASR IYDQFSETTD AIIDFAQDDI YLSLDLNMHL
ASQLYPLHSQ MRQMGVQVSY IVYDLLLFHR PDWWVAPNAE LFNDWLQKIS MVASSLICIS
GAVADELKQW LADNVDKCAG NKPSVKSFHL GADIDNSLPS AGLPDDAGEL LARLAQKPSF
LMVSTVEPRK GHAQTLSAFE SLWEQGQDIN LVIVGKRGWL VDELVARLEN HPEKGNRLFW
LEGISDEYLE KIYSASTCLI AASEGEGFGL PLIEAAQYGL PMIVRDLPVF REIALDHAFY
FSGMNDSDIS AAITAWLDLH KDDKHPGSGD MPWLTWEQSA AQLKKALMFS V