Gene Psyr_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0917 
Symbol 
ID3366410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1042032 
End bp1042826 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content54% 
IMG OID637651261 
Producthypothetical protein 
Protein accessionYP_234013 
Protein GI66044172 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAGC TGTTCAGAAG CCTTTGGGGT TACCGGGGAT TCGTCTTTTC ATCTATACGC 
AATGAGTTTT CCGCACGATT CTCCCGTAGC CGCCTGGGTG GCCTGTGGAT GATCATCAAC
CCGCTGGCAC AGGTTGCGAT CTACGCGCTG GTTCTCTCCA ACGTTCTGGC TGCCAAACTA
CCCGGCATCG ACAACAAGTA TGCCTACGCG GTCTACCTGA TGGCCGGTAT GCTGGCCTGG
AGCTATTTTT CAGAGATCAT CGGTCGTTGC CTGACACTGT TCATCGACCA GGGCAACCTG
ATGAAGAAGA TGCGCTTTCC GCGCATCACA CTGCCGGTGA TTGTCGCGGG TTCATGCCTG
CTCAATTACG TACTGTTGTT TGCAGCCATT CTGCTGGTCT TCGCTGCGTT GGGGCAATGG
CCGCACTGGC AAATGTTGTG GCTGATCCCG CTGACTATCG TGATTACTGC GCTGGCCGTA
GGGCTGGGGT TGATTCTGGG CGTCTTGAAC GTATTCATAC GCGACGTTGG CCAGGTCATT
CCCATTCTGC TGCAGGTATG GTTCTGGTTT ACCCCGATTG TCTACCCGCT CAACATCATC
CCTGAACAAT TCAAGAGTGT CATGGGCATC AATCCCATGT TCCCGATCGT CAGTGCCTAT
CACGATGTTC TGGTTTATGC GCGAGCGCCT GATCTGCAAA GTATGGCCGT CATCGCCGTT
GTCGCTGCTG GGTTAATGCT GTTGGGTCTC TTCATGTTTC GCCGGGCGGC GCCGGAAATG
GTGGATGTAC TATGA
 
Protein sequence
MLELFRSLWG YRGFVFSSIR NEFSARFSRS RLGGLWMIIN PLAQVAIYAL VLSNVLAAKL 
PGIDNKYAYA VYLMAGMLAW SYFSEIIGRC LTLFIDQGNL MKKMRFPRIT LPVIVAGSCL
LNYVLLFAAI LLVFAALGQW PHWQMLWLIP LTIVITALAV GLGLILGVLN VFIRDVGQVI
PILLQVWFWF TPIVYPLNII PEQFKSVMGI NPMFPIVSAY HDVLVYARAP DLQSMAVIAV
VAAGLMLLGL FMFRRAAPEM VDVL