Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0901 |
Symbol | |
ID | 3366393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1020139 |
End bp | 1021023 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637651244 |
Product | senescence marker protein-30 (SMP-30) |
Protein accession | YP_233997 |
Protein GI | 66044156 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.936604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCG AACTGATTGT CGATGCACAG AACGCCACCG GCGAAAGCCC GGTCTGGAGC GTGCGTGATC AAGCGCTGTA CTGGGTGGAT ATTCCCAAGG GCGAGCTGCA TCGCTGGGAC TTCAATCAGG ACAGCACGCG CAGCTGGAAA GCGCCGCAAA TGCTCGCCTG TATCGCCGCC GACAGCCGGG GTGGCTGGGT GGCGGGGATG GAGAACGGAA TCTTCCATTT GCAGCCCTGC GAAGACGGCA GCCTGATCAG CACGCTTCTG GCCGGCGTCG AACACGCGCA GACAGGCATG CGCTTCAATG ACGGCCGCTG CGACCGACAG GGTCGGTTCT GGGCGGGCAC CATGTTCATG GACATGGCCG CCGGTGCGAG GGTGGGTGCG TTGTATCGCT ACAGTGCCGG CCAGAAGACA CTGGACGCAC AGCTCAAGGA TTTCATCGTC CCCAACGGCC TGGCGTTCAG CCCCGACGGC AAGGTCATGT ACCTGTCCGA CTCGCACCCC AGCGTGCAGC AGATCTGGGC GTTCGATTAC GACACCGACA GCGGCACGCC ACACAATCGC CGCCTGTTCG TCGACATGAA CCATCACCTG GGTCGCCCTG ACGGCGCAGC GATCGACGCC GACGGCTGCT ACTGGATCTG TGGCAACGAC GCAGGCCTGG TTCACCGCTT CACTCCCACC GGCAAACTCG ACCGCTCGCT GGTCGTGCCG GTGAAAAAGC CAGCCATGTG TGCCTTTGGC GGCCCCAATC TGGACACCCT GTTCGTGACG TCGATTCGCC CGGGTGGCGA CATCGGCGAT CAGCCGCTGG CCGGTGGCGT TTTCGCCCTG CGACCTGGCG TGCAGGGCCT GGAGGAACCC ACGTTTCAGG GCTGA
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Protein sequence | MDAELIVDAQ NATGESPVWS VRDQALYWVD IPKGELHRWD FNQDSTRSWK APQMLACIAA DSRGGWVAGM ENGIFHLQPC EDGSLISTLL AGVEHAQTGM RFNDGRCDRQ GRFWAGTMFM DMAAGARVGA LYRYSAGQKT LDAQLKDFIV PNGLAFSPDG KVMYLSDSHP SVQQIWAFDY DTDSGTPHNR RLFVDMNHHL GRPDGAAIDA DGCYWICGND AGLVHRFTPT GKLDRSLVVP VKKPAMCAFG GPNLDTLFVT SIRPGGDIGD QPLAGGVFAL RPGVQGLEEP TFQG
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