| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0900 |
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| Symbol | |
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| ID | 3366392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1019056 |
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| End bp | 1020081 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637651243 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_233996 |
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| Protein GI | 66044155 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCA AACGCAAGCT CCTCATCGCA GCACTTCCGC TGGCCTTCTG TGTATCAGGC
ATGGCCCAGG CAGACGTCAA AATCAAATTC GCCGAGGTTC ACCCTGCTGG CTATGCGCCG
GTCGTGGCAG AGCAGAACAT GGGCAAGAAA CTCGAAGAAC AGTCCAAGGG CGAGATCAGT
TTCAAAATGT ACGCTGGCGG TGTGCTCGGC TCCGAGAAGG AAGTCGTCGA GCAGGTCCAG
AGTGGCGCCG TGCAGATGAC CCGCGTCAGC CTCGGCATCG TTGGCCCGGT AGTGCCGGAC
GTCAACGTCT TCAACCTGCC GTTCGTGTTC CATGATCAGG CGCATATGCG CACCATCATC
GATGGCCAGA TCGGTCAGGA AATTCTCGAC AAGATCACCA ACTCCGAATT CAACATGGTC
GCCCTGGCGT GGATGGATGG CGGCACCCGC AACCTGTACA CCAAGAAGCC GGTACGCCAG
ATTTCCGACC TCAAAGGCAT GAAAATCCGC GTTCAGGGCA ACCCGGTGTT TATCGAAACC
ATTAACGATA TGGGCGGCAA CGGCATCGCC ATGGCCACCG GCGAGATCTT CAGCGCCCTG
CAGACCGGCG TCATTGACGG TGCGGAAAAC AACCCGCCGA CGTATTTCCA GCATAACCAC
TACCAGAACG CCAAGTTCTT CACCATGACC GAACACCTGA TCCTGCCCGA GCCCATCGTG
ATGTCGAAAA CCACGTGGGA AAAGCTCAAC CCCGAGCAGC AGGCACTGGT GAAAAAGCTC
GCACGTGAAG CGCAGATGGA AGAACGCGTG CTGTGGGACA AGTCGTCAGC CGATGCCGAG
ACCAAGCTCA AGGCTGCTGG CGTGGAGTTC ATCACGCTGA CGCCCGAGCA GAAGAAAGCC
TTCTACGACG CGACCCAGCC GGTACGCGAC AAATACGGTG CGAAATATAA GGGTCTGATC
GACCGCATCG GAGCGGTCCA GACCGATCCG GCACTGGCGG CGAGCAACCC CCAAGCGGCC
CAATAA
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| Protein sequence | MDFKRKLLIA ALPLAFCVSG MAQADVKIKF AEVHPAGYAP VVAEQNMGKK LEEQSKGEIS
FKMYAGGVLG SEKEVVEQVQ SGAVQMTRVS LGIVGPVVPD VNVFNLPFVF HDQAHMRTII
DGQIGQEILD KITNSEFNMV ALAWMDGGTR NLYTKKPVRQ ISDLKGMKIR VQGNPVFIET
INDMGGNGIA MATGEIFSAL QTGVIDGAEN NPPTYFQHNH YQNAKFFTMT EHLILPEPIV
MSKTTWEKLN PEQQALVKKL AREAQMEERV LWDKSSADAE TKLKAAGVEF ITLTPEQKKA
FYDATQPVRD KYGAKYKGLI DRIGAVQTDP ALAASNPQAA Q
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