Gene Psyr_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0885 
Symbol 
ID3366377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1007811 
End bp1008260 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID637651228 
Producthypothetical protein 
Protein accessionYP_233981 
Protein GI66044140 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGC CCATACGCGA CTATCATCCA GCCCTGCCCC GGCAGGACGA TTTCTGGCAA 
CACTTGGGCA TTCCCGCACG AGGCGCGCGG CTGTACTCGG CGCTGCATGA CGGCTTGCCG
TATGAAGTCT TCGAACGTCT GGCGCATTAC ACCGACCTGA ACCGCTCGAC CCTGGCCGAA
CATCTGGGCA TCGCTCCGGC GACCTTGCAG CGACGTCTCA AGGTGCGCCG CTTCAATGCC
GAGGAAAGCG ATCGGCTGTT CCGCCTGGCA GCGGTGTACA AGGCGGCGCT GGACCTGTTC
GAAAACGACG CCGAAGCGAC TCGTCTGTGG CTGGCCAACC CGGTCTACGG GCTGGGTACT
CGCAGGCCGC TGGAAATGCT CGCGACCTCG GCGGAGGCTC AGGCAGTGCT CGACCTGATC
GGCCGCCTGG AGCACGGGGT CGTGGCGTGA
 
Protein sequence
MSLPIRDYHP ALPRQDDFWQ HLGIPARGAR LYSALHDGLP YEVFERLAHY TDLNRSTLAE 
HLGIAPATLQ RRLKVRRFNA EESDRLFRLA AVYKAALDLF ENDAEATRLW LANPVYGLGT
RRPLEMLATS AEAQAVLDLI GRLEHGVVA