Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0874 |
Symbol | |
ID | 3366366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 996605 |
End bp | 997012 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637651217 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_233970 |
Protein GI | 66044129 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.7959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACGT GGGACGAACC TAAAAAGCGC AAGGCGCACA TCGAACTGAT CCCCATGATC GACGTGATGA TGTTCCTGCT GGTCTTTTTC GTATTGGTAA GCCTGAACGT GATTCCAGCG TTGGGGATGA AAACCCAGTT GCCGAGCGCC AGCAGTTCAC AGCAGCTCAA GCCGCAGAAC AAATCGATCC TGACGCTGGG GCTCAACGGC GAATTACAGC TCGACGGCAA GGCGACCACG GTCGACGCTC TGGTGCCTGC CTTGAAGGCG CTGGAAAAAC CCGACAGCAA AACCACGATC ATCGTTAACA GTGACAAGGG CGTGGAAGTC GCCCGGCTGG TCGAGATTAT GGACACCCTG CGTCTGGGTG GCTTCACGTC AGTCTCCATC GCCACGCGCA AATCCTGA
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Protein sequence | MRTWDEPKKR KAHIELIPMI DVMMFLLVFF VLVSLNVIPA LGMKTQLPSA SSSQQLKPQN KSILTLGLNG ELQLDGKATT VDALVPALKA LEKPDSKTTI IVNSDKGVEV ARLVEIMDTL RLGGFTSVSI ATRKS
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