Gene Psyr_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0874 
Symbol 
ID3366366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp996605 
End bp997012 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content56% 
IMG OID637651217 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_233970 
Protein GI66044129 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.7959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACGT GGGACGAACC TAAAAAGCGC AAGGCGCACA TCGAACTGAT CCCCATGATC 
GACGTGATGA TGTTCCTGCT GGTCTTTTTC GTATTGGTAA GCCTGAACGT GATTCCAGCG
TTGGGGATGA AAACCCAGTT GCCGAGCGCC AGCAGTTCAC AGCAGCTCAA GCCGCAGAAC
AAATCGATCC TGACGCTGGG GCTCAACGGC GAATTACAGC TCGACGGCAA GGCGACCACG
GTCGACGCTC TGGTGCCTGC CTTGAAGGCG CTGGAAAAAC CCGACAGCAA AACCACGATC
ATCGTTAACA GTGACAAGGG CGTGGAAGTC GCCCGGCTGG TCGAGATTAT GGACACCCTG
CGTCTGGGTG GCTTCACGTC AGTCTCCATC GCCACGCGCA AATCCTGA
 
Protein sequence
MRTWDEPKKR KAHIELIPMI DVMMFLLVFF VLVSLNVIPA LGMKTQLPSA SSSQQLKPQN 
KSILTLGLNG ELQLDGKATT VDALVPALKA LEKPDSKTTI IVNSDKGVEV ARLVEIMDTL
RLGGFTSVSI ATRKS