| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0867 |
|---|
| Symbol | |
|---|
| ID | 3366359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 986935 |
|---|
| End bp | 988947 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637651210 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_233963 |
|---|
| Protein GI | 66044122 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTT CTTCCATCGA ACAACTCACT TCGCTGCCGT CCATCCTTGC CGGCCCGTTA
TTGCGCCGTC AGGAAGCCGG CCGCCTGGTG TTGTGGCTGG TAGGGTCCCG TCGGTTGCGC
CTTACCGTGC GCCTGCGCCA TGCCGCTACT GATGATCCCT CTGCGGGCTT CAACGATTAC
GTACTCGACG ACAGTCAATG TCAGGTTATT GCAGTCGGGC GCCAGGCGTT CATTCACCTG
ATCGACCTGC AACTGGAAGC CGAACTGCCC CGCGACACCT GGATCGATTA CGACCTGCGG
GTGGAGGGCG AAGGCGGTAT TGCCGAGTGG GCGCCGCACT TGCTGTACGA GGGCAACCGC
TACCCGAACT TCGTGGTGCG CAGCAGCATC GATCACCTGC TGCATGGCTC GTGCCGCAAG
CCGCACCACA GCGCAGCCGA AGGTCTGCTT TGCGTAGACC GCCTGCTGGC TGATATCAAG
GAACCGCTGC AACGCCCTGC GCTGTTGATG ATGAGCGGCG ATCAGATTTA CGCCGACGAT
GTTGCCGGGC CGATGCTGCG CGCCATCCAT GTCTTGATCG AACGGCTGGG GTTGTTCGAC
GAGCGACTCG ACGGTGCCAT CGTCGATGAC AGCCCTCGTC TCTATGCGCA TCCGGCCAGC
TATTACCAGC GTGCCGACCT GCTGCCGGCC CTGAAAAGCA ACGACACACT GCGCGAGCGC
TTCTTCGGCG GCACCAGCAA ACCGGTATTC ACCAGCAGCA CAGCGGATAA CCATCTGGTT
ACCCTGGCGG AAGTCATGGC GATGTACCTG CTGGTCTGGT CACCCACGCC CTGGACCCTG
ATCGAACCCG GCAGGCCGCA ACTGGAAGAC GGGGAAGTCG AGCGCTACGC CACGGAACAG
CAGCTGGTCG AGGCGTTTGC CGCCGGCCTG AGCGGCGTGG CACGGGCGAT GGCGCATCTG
CCGTGCATGA TGATTTTCGA CGACCACGAC ATCACCGATG ACTGGAACCT GTCGGCGAAC
TGGGAGCAAA CCGCGTACGG CCATCCATTC TCCAAACGCA TCATCGGCAA CGCCCTGCTT
GCCTACCTGC TGTGCCAGGG CTGGGGCAAT AACCCGGATG CGCTCAACGG TCTGGTCAAG
CAGGCTCATG CCCTGAGCAC CGACGCCGTA TCGAACGACA ACTGGCTGGA CAGCCAGGCC
CAGGACCAGT TGATTGATCA GTTGTTGAAG TTTCAGCAAT GGCATTACGT GTTACCCACC
AGCCCGGCAC TGGTGGTACT GGATACCCGC ACCCGGCGCT GGCGCAGCGA GTCGAACTTC
AATCACCCGT CCGGCCTGCT CGACTGGGAA GCGCTCAGCG AACTGCAGCA GGAGCTGATC
GACCACAAAT CAGCGATTAT CGTCTCACCT GCCCCCGTGT TCGGCGTCAA GTTGATCGAG
GCGATACAAC GCATCTTCAG CTGGTGCGGC TATCCGTTAC TGGTCGATGC AGAAAACTGG
ATGGCACATC GCGGTGCCGC CAACGTGATT CTGAACATCT TTCGCCATTC CAGAACCCCG
GGCAATTACG TGATTCTGTC GGGCGATGTG CATTACTCGT TCGTCTACGA AATCCTGATT
CGCCAACGCA GTGGCGGGCC TCATATCTGG CAAATCACCA GCAGTGGCAT CAAGAATGAA
TTCCCCCGTC GTCTGCTGGA CACTTTTGAT CGGCTGAATC GCTGGTTATA CTCTCCCCGC
TCACCTCTTA ACTGGTTCAC CAAGCGCCGC CTGATGAAGG TTGTTCCGCG CACGCCCGAG
CACAGCAAGG TCGGTGAACG CTTATGGAAC TCGGCGGGTG TCGGGCAGGT ACTGTTCAAT
GAACAGGGCC AGCCGACCCT GATCAACCAA CTCAATGCCA ACGGTGATGC GCCTACCTGT
TTCGTCGAAC CGGAAGAATA CAGAGACCAG CGATCTGACC CAGAGCGTGG CTTTCTGGAA
AACAACCGGG AAACAAGGGA TAGTCACCGC TAA
|
|---|
| Protein sequence | MSASSIEQLT SLPSILAGPL LRRQEAGRLV LWLVGSRRLR LTVRLRHAAT DDPSAGFNDY
VLDDSQCQVI AVGRQAFIHL IDLQLEAELP RDTWIDYDLR VEGEGGIAEW APHLLYEGNR
YPNFVVRSSI DHLLHGSCRK PHHSAAEGLL CVDRLLADIK EPLQRPALLM MSGDQIYADD
VAGPMLRAIH VLIERLGLFD ERLDGAIVDD SPRLYAHPAS YYQRADLLPA LKSNDTLRER
FFGGTSKPVF TSSTADNHLV TLAEVMAMYL LVWSPTPWTL IEPGRPQLED GEVERYATEQ
QLVEAFAAGL SGVARAMAHL PCMMIFDDHD ITDDWNLSAN WEQTAYGHPF SKRIIGNALL
AYLLCQGWGN NPDALNGLVK QAHALSTDAV SNDNWLDSQA QDQLIDQLLK FQQWHYVLPT
SPALVVLDTR TRRWRSESNF NHPSGLLDWE ALSELQQELI DHKSAIIVSP APVFGVKLIE
AIQRIFSWCG YPLLVDAENW MAHRGAANVI LNIFRHSRTP GNYVILSGDV HYSFVYEILI
RQRSGGPHIW QITSSGIKNE FPRRLLDTFD RLNRWLYSPR SPLNWFTKRR LMKVVPRTPE
HSKVGERLWN SAGVGQVLFN EQGQPTLINQ LNANGDAPTC FVEPEEYRDQ RSDPERGFLE
NNRETRDSHR
|
|---|
| |