Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0865 |
Symbol | |
ID | 3366357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 984855 |
End bp | 986063 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651208 |
Product | sugar efflux transporter |
Protein accession | YP_233961 |
Protein GI | 66044120 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.031194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.735607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAACTT CACCTCCAAA CGAGCAGGCA GGTAGCTGGC TTGGCGTATT CGCGCTGGCC TTGGCGGCCT TCATTTTCAA TACCACCGAG TTCGTGCCGA TCGGTCTGCT GAGTAACATC GGCCAGAGCT TCGAAATGAC CCCGGCCCAG GTCGGGCTGA TGCTCACGAT CTATGCCTGG GTCGTGTCGC TGATGTCGTT GCCGATGATG CTGGCGACGC GCAACATCGA GCGCCGCAAG TTGCTGATGT TCGTGTTCGG CCTGTTCGTG GTCAGCCACG TCCTTTCCGC GATTGCCCCC AGCTTCGCGA TCCTGCTGGT GAGCCGGGTC GGTATCGCGT TTGCACATGC GGTGTTCTGG TCGGTCACGG CGTCGCTGGC CGTGCGCATC GCACCGCCCG GCAAGCAGGT TCAGGCGCTG GGCCTGCTGG CGACCGGTAC GTCGCTGGCG ATGGTATTGG GTATTCCGCT GGGCCGCGTG CTGGGTGAAG CCCTGGGCTG GCGCACCACC TTTCTGGGCA TCGCCGCCAT CGCTGCGCTG GTAGTCTTCC TGCTGGTTCG CGCGCTGCCT TTGCTGCCCA GTCAGAACTC AGGCTCGTTG CGCAGCCTGC CGATCCTGTT CAAGCGCCCA CGGCTGATGG CGATCTACCT GCTGACCGCC ATCGTGGTGA CCGCTCATTT CACCGCCTAC AGCTATATCG AGCCGTTCAC TCAGACCGTG TCCCTGCTCA GCGGCGAAAT GACCACGATC CTGCTGCTGG TCTTTGGCGG GGCCGGGATC ATGGGCTCGA TCATCTTCAG CCTGTTCAGC GATCGCTTCC CCAACGGGCT GTTGATCACG GCCATTGGCA CGCTGACCCT GTGCCTGCTG ATGCTGTTGC CGCTCTCCGG TGATGCCGTG ACGCTCGGCA CGCTGACCAT TATCTGGGGC ATGGCGATCA TGTGCTTCGG CCTGACCTTG CAGGCGCGCG TACTGTCGCT GGCACCCGAT GCGACCGATG TGGCGATGGC GCTGTTCTCG GGCATCTTCA ATATCGGTAT TGGCGGCGGC GCGCTGCTCG GCAGTGTGGT CAGCAGCCAT CTCGGGGTTG CCAATGTCGG CATCGTCGGC GGCCTGCTGG CCCTCGGCGG GTTGGGGCTG TGCTGCTACA CAACGCATCA CTTCGGCAAG GTCCGGCCTG CTGCCGAGAT GCAGGCCGAG AGCAAATAG
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Protein sequence | MITSPPNEQA GSWLGVFALA LAAFIFNTTE FVPIGLLSNI GQSFEMTPAQ VGLMLTIYAW VVSLMSLPMM LATRNIERRK LLMFVFGLFV VSHVLSAIAP SFAILLVSRV GIAFAHAVFW SVTASLAVRI APPGKQVQAL GLLATGTSLA MVLGIPLGRV LGEALGWRTT FLGIAAIAAL VVFLLVRALP LLPSQNSGSL RSLPILFKRP RLMAIYLLTA IVVTAHFTAY SYIEPFTQTV SLLSGEMTTI LLLVFGGAGI MGSIIFSLFS DRFPNGLLIT AIGTLTLCLL MLLPLSGDAV TLGTLTIIWG MAIMCFGLTL QARVLSLAPD ATDVAMALFS GIFNIGIGGG ALLGSVVSSH LGVANVGIVG GLLALGGLGL CCYTTHHFGK VRPAAEMQAE SK
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