| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0860 |
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| Symbol | |
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| ID | 3366352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 978915 |
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| End bp | 980591 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651203 |
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| Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
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| Protein accession | YP_233956 |
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| Protein GI | 66044115 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.572392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAGAT TTCTGCCTCG TTTCCTACGT CGGCAAGCCA CAACGCCAAC ACTCTTGCGC
CGCTTCAAAA TCACGCTGCG CCTGGTGATC TGCTTCGCTA TAACCTCCCT GCTGATGGTC
GCGCTTGGCG TATTCTGCCT GTTGCAGATG CAGGCTATCC GCACCCAGGG CGAGGCGGTC
GAGAGCGGCG CCCTGCCCAG TATCGCCACC GCCGATGCCA TCGCTATCGG CCTGGTCAAA
CTGCGCAGCG AAACCACCCG TCTGATCGCC AACGCCGACG ATCCGGGTGC CGTTATCAAC
AGCAAGATCA ATGTCGAACA ACTCAGGAAC GAGGTCGAGA AAGGCTTCTC GGAATACCTG
GCGCGTGTTC AGTCGGGCAC TGAGCATGAC TCGATTGTCG CGTTGCAGGA TGCCTACAAG
GCCTTCATGC CCGGCTTGCA GGATCAGATC GCGCTGATCG AGCAGAACAA GCTGGACGAG
GCCAGGACGC TGGCCAACAC CGTGCTCTCG CTGCAGGGTG ACCTGATGGA CATGCAGGTG
CAGCTGTTGC GCGAACTGAA CACGCAGAGT GCGGCCGCCG CTGTAGAGGC CGCAGGTGCC
AGCTATGAAC AGACCCGGAT CATCGCGCTG AGCGCCATCG GCCTGGTTCT GGTACTGACC
CTGTTGCTGG CTTGGCGCCT GAGCGTCAGC ATCATCCATC CGGTGCGGCA GGCCTTACAC
ATCGCCAGCA CCATTGCCGA TGGTGACCTG AGCGAACACC CGATACCGGA CGGCAAGGAC
GAGACCGCAC AATTATTGAT CACGCTCGGG CGCATGCGTA CCAACCTGCA CAGTACGATC
GACCAGATCT ACGCAGCGGC GACGCAGTTG TCGCAGTCGG TTCAGGAAAT GGGCAGCATC
GCCGAAGCCA GTGCGCTCAA TCTGCAGCTG CAGAACACTG AAATCGAGCA GGCCGCTGTC
GCGGTCAATC AGATGAGCCA GGCGGCCATC GAAGTGGCAG GCAACGCCAG CAATACCGTG
ACCGAATCGG AGGCGTCAAC CCGGGCGGCG GCACAAGGGC AGGAAAAGCT GTCGGCAACC
ATTCTGTCGA TCAAGGCGTT GACCGAGAAT GTGCTGGATT CGTCGCATCA GGCTGAAGGG
CTGGCCGAAC GTACCCAGAG CATCAGCAGC ATCCTCGATG TGATTCGCGC AATCGCCAAT
CAGACCAACC TGCTGGCGCT GAACGCGGCT ATCGAAGCGG CTCGTGCAGG CGAAGCCGGG
CGAGGCTTTG CCGTGGTGGC CGATGAAGTC CGCTCACTGG CGCAGCGCAC CAGTGCATCC
ACCGCGGAAA TCGAAGGGCT GATCAGCGGC GTGCAGCAAA GCACCCAACA AACCGCCAGC
TCGCTGCGCC ACACGGCGAC GCAGGCCAAT CTGACAATGG AACAGGCCGC CTCGACCGGC
GAAGCCTTGC AAGTGATCAT CCAGTCAACC GCCACCATCA ACGACCGCAA CCTGCTGATT
GCCAGTGCCG CAGAGCAGCA GGCCCAGGTG GCGACTGAGG TGGACCGCAA CCTGAGCAGT
ATTCGCGACC TGTCCAGCCA GACCGCATCG GGCGCGCAGC AGACCACCGT CGCGAGTAAC
GCACTGTCGA TGCTGGCGAC TGATCTGAAC CTGATGGTGC AGCGTTTCGT GCTGTGA
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| Protein sequence | MKRFLPRFLR RQATTPTLLR RFKITLRLVI CFAITSLLMV ALGVFCLLQM QAIRTQGEAV
ESGALPSIAT ADAIAIGLVK LRSETTRLIA NADDPGAVIN SKINVEQLRN EVEKGFSEYL
ARVQSGTEHD SIVALQDAYK AFMPGLQDQI ALIEQNKLDE ARTLANTVLS LQGDLMDMQV
QLLRELNTQS AAAAVEAAGA SYEQTRIIAL SAIGLVLVLT LLLAWRLSVS IIHPVRQALH
IASTIADGDL SEHPIPDGKD ETAQLLITLG RMRTNLHSTI DQIYAAATQL SQSVQEMGSI
AEASALNLQL QNTEIEQAAV AVNQMSQAAI EVAGNASNTV TESEASTRAA AQGQEKLSAT
ILSIKALTEN VLDSSHQAEG LAERTQSISS ILDVIRAIAN QTNLLALNAA IEAARAGEAG
RGFAVVADEV RSLAQRTSAS TAEIEGLISG VQQSTQQTAS SLRHTATQAN LTMEQAASTG
EALQVIIQST ATINDRNLLI ASAAEQQAQV ATEVDRNLSS IRDLSSQTAS GAQQTTVASN
ALSMLATDLN LMVQRFVL
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