| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0850 |
|---|
| Symbol | |
|---|
| ID | 3366337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 962540 |
|---|
| End bp | 963553 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637651188 |
|---|
| Product | putative sulfite oxidase subunit YedY |
|---|
| Protein accession | YP_233946 |
|---|
| Protein GI | 66044105 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0251202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0119403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATCA AACTTCCTTC TGCGTCCGAC TCCAAAGAGT CGGACGTCAC GCCTGAATCC
ATTTATCTCT CGCGACGCAC ATTGCTCGCC AGCTCGCTTG CAGGTCTTGC CGTCACGGCA
ATGCCGCGCT GGGCGGGGGC CGCAGATGCT TCGCGGTATG CCGATGTAGA GCCAGGCAAA
GCGCCAGGCT GGTTCGCGGA AAAACTACCC GCCACGAAAT GGCAGGCGGT CAACGTCCAG
GACGAGGCGA TCACGCCGTT CAAGGACGCA ACCCATTACA ACAACTTCTA TGAGTTCGGT
ACTGACAAGG GCGATCCTGC CAAGAACGCT GGCTCTCTGC AGACCGAGCC CTGGAGTGTC
GTGATAGATG GTGAAGTCGC CAAGCCTGGC CGCTATGCGC TCGAAGACTT CATGAAGCCT
TACCAATTGG AAGAGCGGAT CTACCGTTTG CGTTGCGTCG AAGCCTGGTC AATGGTCATT
CCGTGGATTG GTTTTCCGAT CGCTGCGTTG CTCAAGCAGG TAGAGCCGAC CTCCAAAGCC
AAGTACATCC GGTTCGAAAC GCTGGAGGAC GCCAAGTCCA TGCCGGGTCA GCGCTCGGAC
TTTGCCCTGA TCGACTGGCC TTATGTAGAA GGGCTGCGTC TGGATGAGGC GATGAATCCT
CTGGCGATTC TGGCGGTGGG CATGTATGGG CGTGAGCTGC CTAACCAGAA TGGCGCACCG
TTACGCCTGG TGGTGCCATG GAAGTACGGT TTCAAGAGTG TGAAGTCCAT CGTGCGTATC
AGTCTGGTCA GTGAGCAGCC GAAGACCACT TGGCAAAGCA TTGCGGCAAA CGAGTATGGC
TTCTATGCCA ACGTCAACCC GACTGTCGAT CACCCGCGCT GGACGCAAGC CCGCGAACGC
CGCTTGCCGA GCGGTCTGTT CAGCCCGAAT CTGCGCGACA CGAAAATGTT CAATGGATAT
GAGGAAGAGG TGGGTTCCTT GTACGCCGGC ATGGATTTGC GGAAGGACTA TTGA
|
|---|
| Protein sequence | MLIKLPSASD SKESDVTPES IYLSRRTLLA SSLAGLAVTA MPRWAGAADA SRYADVEPGK
APGWFAEKLP ATKWQAVNVQ DEAITPFKDA THYNNFYEFG TDKGDPAKNA GSLQTEPWSV
VIDGEVAKPG RYALEDFMKP YQLEERIYRL RCVEAWSMVI PWIGFPIAAL LKQVEPTSKA
KYIRFETLED AKSMPGQRSD FALIDWPYVE GLRLDEAMNP LAILAVGMYG RELPNQNGAP
LRLVVPWKYG FKSVKSIVRI SLVSEQPKTT WQSIAANEYG FYANVNPTVD HPRWTQARER
RLPSGLFSPN LRDTKMFNGY EEEVGSLYAG MDLRKDY
|
|---|
| |