Gene Psyr_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0835 
Symbol 
ID3366322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp947408 
End bp947848 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content56% 
IMG OID637651173 
Producthypothetical protein 
Protein accessionYP_233931 
Protein GI66044090 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00111035 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCACCC CAGAAAAGCA ACAGAACCAT CTAATCAGCG GCTTTGAGCC CTACGTGCCA 
ACGAAGGGTG AAGAGTACAT GGGCGAGCCG ATGCGCGCGC ACTTCACCAA GATCCTGAAC
AAGTGGAAGC AGGACTTGAT GCAAGAGGTC GACCGAACGG TAGACCATAT GAAGGACGAA
GCTGCCAACT TCCCCGACCC GGCCGACCGT GCCAGTCAGG AAGAAGAGTT CAGCCTTGAA
CTTCGTGCCC GCGATCGCGA ACGCAAGTTG ATCAAGAAGA TCGACAAGAC GCTGCAACTG
ATCAAGGACG AAGAATATGG CTGGTGCGAA TCCTGCGGCG TAGAGATCGG CATCCGCCGT
CTTGAGGCTC GCCCGACTGC AGACCAGTGC GTCGACTGCA AGACCCTCGC AGAAATCAAG
GAAAAACAGG TCGGTAAATG A
 
Protein sequence
MPTPEKQQNH LISGFEPYVP TKGEEYMGEP MRAHFTKILN KWKQDLMQEV DRTVDHMKDE 
AANFPDPADR ASQEEEFSLE LRARDRERKL IKKIDKTLQL IKDEEYGWCE SCGVEIGIRR
LEARPTADQC VDCKTLAEIK EKQVGK