| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0832 |
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| Symbol | |
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| ID | 3366319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 942776 |
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| End bp | 945730 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637651170 |
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| Product | PAS |
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| Protein accession | YP_233928 |
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| Protein GI | 66044087 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00253594 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGATGA GCTTTAGTCT GACGCAGATG CTGCTGGTCA GCGCCGCCTA CCTGCTGGTG
CTGTTCGGTG TAGCCTGGGT CAGCGAACAC GGCCTGATTC CGCGCTGGAT CATTCGTCAT
CCGCTGACTT ACACCCTGTC ACTGGGCGTC TACGCCAGCG CCTGGGCGTT TTATGGCACG
GTCGGTCTGG CCTATCAGTA TGGCTACGGC TTTCTGTCCA GTTATCTGGG GGTATCCGGG
GCCTTCCTCC TCGCGCCGGT GCTGCTTTAC CCGATCCTCA GAATTACCCG CACCTACCAG
CTGTCATCAC TGGCCGACCT GTTCGCCTTC CGTTTTCGCA GCACCTGGGC CGGTGCACTG
ACCACCGTAT TCATGCTGAT CGGCGTGCTG CCGCTGCTGG CCTTGCAGAT TCAGGCGGTC
GCCGACTCCA TCGGCATTCT GACCCGCGAG CCCGTGCAGG ACAGGGTCGC CGTGGCGTTC
TGCGCACTGA TCACCCTGTT CACGATTTTC TTCGGCTCAC GGCACATCGC GACCCGCGAG
AAACACGAGG GCCTGGTGTT CGCCATCGCC TTTGAATCGC TGATCAAGCT GATTGCCCTG
GGCGGCGTCG GGCTGTATGC CTTGTATGGC GTGTTCGACG GACCGCAACA ACTGGAACTG
TGGCTGCTGC AGAACCAGAC CGCCCTCGCC TCGCTGCACA CGCCTTTGCA GGAAGGCCCG
TGGCGCACGC TGCTGCTGGT GTTCTTCGCC TCGGCCATCG TCATGCCGCA CATGTATCAC
ATGACCTTTA CCGAAAACCT CAATCCGCGC TCGCTGGTCA GCGCCAGTTG GGGTCTGCCG
CTGTTTCTGC TGTTGATCAG CCTGGCAGTG CCGTTGATCC TCTGGGCCGG GCTGAAACTT
GGCGCCACCA CCAGCCCGGA ATACTTCACG CTCGGCATCG GTATCGCCGC CAACAGCAAG
TCCCTGGCCC TGCTCGCTTA CATCGGCGGG CTGTCGGCGG CCAGCGGGCT GATCATCGTC
ACCACGCTGG CGTTGTCCGG CATGGCACTC AATCACCTGG TGCTGCCGCT GTATCAGCCA
CCCGCCGAGG GCAATATCTA CCGCTGGCTG AAGTGGACAC GACGCGGACT GATCGTGGCG
ATCATCGCGC TGGGTTACGG CTTCTACCTG ATGCTCGGCG CGCAGCAGGA TCTGGCCAAC
CTGGGCATCG TCGCCTTCGT TGCAACCCTG CAATTTCTGC CGGGCGTGCT GTCGGTGCTG
TACTGGCCGA CCGCCAACCG ACGCGGCTTC ATCGCCGGGC TGCTGGCCGG CATTTCAGTC
TGGGCGGTCA GCATGCTGTT GCCGCTGATC GGCAACCTGC AGGGCTTCTA TATTCCCTGG
CTGAACATGA TCTATGTGCT GGACGACACC AGTTGGCACA TGGCAGCCAT CGCCTCGCTC
GCCGCCAACG TCTTGCTGTT CACCCTGATC TCGCTGTTCA CCAATGCCAG CCCTGAAGAA
GCCGGGGCCG CCGAGGCCTG CGCAGTCGAC AACGTGCGTC GCCCACAGCG CCGTGAACTG
CACGCCGTGT CGCCGCAGGA GTTCGCCACC CAACTGGCCA AGCCGCTGGG CGCGAAAGCC
GCGCAGAAGG AGGTCGAGCA AGCGCTGCGC GATCTCTACC TGCCCTTCGA CGAGCGCCGC
CCTTATGCCC TGCGCCGCCT GCGCGACCGC ATCGAGGCCA ACCTGTCCGG GCTGATGGGG
CCGAGCGTTG CCCAGGACAT GGTGGAAACC TTTCTGCCGT ACAAATCAGG CAGCGAAAAA
TACGTCACCG AAGACATACA TTTCATTGAA AGCCGGCTTG AGGACTACCA CTCGCGCCTC
ACCGGCCTTG CCGCCGAACT CGATGCCCTG CGTCGCTACC ACCGCCAGAC CCTACAGGAG
CTGCCGATGG GCGTCTGCTC GCTGGCCGAA GATCAGGAGA TCCTGATGTG GAACAGGGCC
ATGGAAGAAT TGACCGGCAT CGTCGCGCAG CGTGTGGTCG GCTCGCGACT GGAAACCATT
GCCGAGCCGT GGAAGAGCCT GCTGACCGGT TTTACCAGCC TGCCCGATGA GCATTTGCAC
AAGCAGAAGC TCGGTCTGGA CGGCCAGACA CGCTGGCTCA ATCTGCACAA GGCAGCCATC
AACGAGCCTC TGGCGCCGGG CAACAGCGGC CTGGTGGTGC TGGTCGAGGA CCTGACCGAC
ACGCAGATGC TCGAAGACAA GCTGGTGCAC TCGGAACGCC TGGCAAGCAT CGGCCGCCTG
GCCGCCGGTG TGGCGCACGA AATCGGTAAT CCGATCACCG GCATTGCCTG CCTCGCCCAG
AACCTGCGCG AAGAACGTGA AGAAGACGGC GAGCTCAAGG AAATCAGCAG CCAGATCCTC
GAACAGACCA AACGCGTATC GCGCATCGTC CAGTCATTGA TGAGCTTTGC TCACGCGGGC
GCTCATCAGC ATAGCGACGA AGCCGTTTGT CTGGCCGTGG TGGCTCAGGA TGCTATTGGT
CTGCTGGCAC TGAACCGGCG CAATTTCGAA GTACACTTCT ACAACCTGTG TAACCCCGAG
CACTGGGCGG TTGGCGATCC GCAACGGCTG GCGCAGGTGT TGATCAACCT GCTCTCCAAC
GCCCGCGACG CCTCCCCGGC AGGCAGCGCA GTCAGGGTCA GAAGCGAAGT ATCCGAGCAC
ACTGTGGACT TGATCGTCGA AGACGAAGGC AGTGGGATTT CAAAGGCAAT CATGGACCGA
TTGTTCGAGC CGTTCTTCAC CACCAAGGAT CCTGGCGAGG GAACCGGACT TGGCCTGGCG
CTGGTCTATT CCATCGTTGA AGAGCATTAT GGACAAATCA CCATCGACAG CCCGGCCGAT
CCCGAGCAGC AGCGTGGAAC CCGAATCAGG GTGACCTTGC CACGCCATGT CGACGCGACG
TCCACCGCGA ACTGA
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| Protein sequence | MPMSFSLTQM LLVSAAYLLV LFGVAWVSEH GLIPRWIIRH PLTYTLSLGV YASAWAFYGT
VGLAYQYGYG FLSSYLGVSG AFLLAPVLLY PILRITRTYQ LSSLADLFAF RFRSTWAGAL
TTVFMLIGVL PLLALQIQAV ADSIGILTRE PVQDRVAVAF CALITLFTIF FGSRHIATRE
KHEGLVFAIA FESLIKLIAL GGVGLYALYG VFDGPQQLEL WLLQNQTALA SLHTPLQEGP
WRTLLLVFFA SAIVMPHMYH MTFTENLNPR SLVSASWGLP LFLLLISLAV PLILWAGLKL
GATTSPEYFT LGIGIAANSK SLALLAYIGG LSAASGLIIV TTLALSGMAL NHLVLPLYQP
PAEGNIYRWL KWTRRGLIVA IIALGYGFYL MLGAQQDLAN LGIVAFVATL QFLPGVLSVL
YWPTANRRGF IAGLLAGISV WAVSMLLPLI GNLQGFYIPW LNMIYVLDDT SWHMAAIASL
AANVLLFTLI SLFTNASPEE AGAAEACAVD NVRRPQRREL HAVSPQEFAT QLAKPLGAKA
AQKEVEQALR DLYLPFDERR PYALRRLRDR IEANLSGLMG PSVAQDMVET FLPYKSGSEK
YVTEDIHFIE SRLEDYHSRL TGLAAELDAL RRYHRQTLQE LPMGVCSLAE DQEILMWNRA
MEELTGIVAQ RVVGSRLETI AEPWKSLLTG FTSLPDEHLH KQKLGLDGQT RWLNLHKAAI
NEPLAPGNSG LVVLVEDLTD TQMLEDKLVH SERLASIGRL AAGVAHEIGN PITGIACLAQ
NLREEREEDG ELKEISSQIL EQTKRVSRIV QSLMSFAHAG AHQHSDEAVC LAVVAQDAIG
LLALNRRNFE VHFYNLCNPE HWAVGDPQRL AQVLINLLSN ARDASPAGSA VRVRSEVSEH
TVDLIVEDEG SGISKAIMDR LFEPFFTTKD PGEGTGLGLA LVYSIVEEHY GQITIDSPAD
PEQQRGTRIR VTLPRHVDAT STAN
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