Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0827 |
Symbol | panC |
ID | 3366314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 936842 |
End bp | 937693 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651165 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_233923 |
Protein GI | 66044082 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000353148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACACAG TAAAAACCTT ACAGGACCTG CGCGCCGCCG TTGCGCGGGC ACGCAGCGAA GGCAAGCGGA TCGCGCTGAC CCCGACGATG GGCAACCTGC ACAGCGGCCA CGCCGCGCTG GTCACCAAGG CGGCGCAGCG TGCCGATTTC GTGGTCGCCA CTATTTTCGT CAATCCGCTG CAGTTCGGCC CCAACGAAGA CCTGGCCACC TACCCTCGCA CGCTGGCTGC CGATCAAGAA AAACTCCTGC AGGCCGGCTG CAATCTGCTG TTCACGCCCA GCGTGGAAGA AATGTACCCG CACGGCATGG CCGACCAGAC ACTGGTCAGC GTGCCGCACC TGTCGCAAGG CCTGTGTGGC GCCAGCCGTC CCGGCCATTT CGAAGGTGTC GCGACCGTGG TCAGCAAGCT GTTCAACATG GTGCAGCCTG ACCTGGCGAT TTTTGGTGAA AAAGACTTCC AGCAACTGGC CGTGATTCGG GCCATGGTGC GTGATCTGAA CATGCCGATC CAGATCATCG GCGAACCGAC GGTACGCGCT GACGATGGTC TGGCGCTGTC CTCGCGCAAC GGGTATCTGA GCGACGATCA GCGCGCCGCG GCACCCGCGC TGTATCAAGC GATCCTCCAG ACCGCCGACG TGATCAGTGC CGGCGAACAG GATTTCGACG CATTGCTGGC GAGCAAGAAG CAGCAACTGG AGGCTGCCGG TTTTCGCATC GACTATCTGG AGATACGCGA TGCCACCAGC CTGCGTCCGG CGACTGCCGA CAATCGCGAA GTGGTCATCC TCGCAGCGGC ATTCCTGGGC AAAACCCGCT TGATCGACAA CCTGCACCTG ACCAGAAGCT GA
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Protein sequence | MNTVKTLQDL RAAVARARSE GKRIALTPTM GNLHSGHAAL VTKAAQRADF VVATIFVNPL QFGPNEDLAT YPRTLAADQE KLLQAGCNLL FTPSVEEMYP HGMADQTLVS VPHLSQGLCG ASRPGHFEGV ATVVSKLFNM VQPDLAIFGE KDFQQLAVIR AMVRDLNMPI QIIGEPTVRA DDGLALSSRN GYLSDDQRAA APALYQAILQ TADVISAGEQ DFDALLASKK QQLEAAGFRI DYLEIRDATS LRPATADNRE VVILAAAFLG KTRLIDNLHL TRS
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