Gene Psyr_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0821 
Symbol 
ID3366308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp926782 
End bp929652 
Gene Length2871 bp 
Protein Length956 aa 
Translation table11 
GC content65% 
IMG OID637651159 
Productphosphoenolpyruvate-protein phosphotransferase 
Protein accessionYP_233917 
Protein GI66044076 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
[COG1925] Phosphotransferase system, HPr-related proteins
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family
[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0946111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC TCACTCTGGA GCAAATATCC ATGGCCCAGT CGGCTGTGGA TAAAACTGCC 
GCACTTAAGC TGATTGCCGA CCACCTGGTC GCTGATGGTC TGGTTGCCGA GGGCTACCTC
ACCGGGCTGA TGAACCGTGA GCAGCAAGGC TCGACCTTCC TCGGTCAGGG CATCGCCATC
CCACACGGTA CACCCGAAAC CCGCGACCTG GTGTTTACCA CCGGTGTGCG TCTGATGCAG
TTCCCCGAAG GGGTGGACTG GGGCGACGGA CAAATGGTTT ACCTGGCGAT TGGTATCGCT
GCCAAATCCG ACGAGCACTT GCGCCTGCTG CAACTGCTGA CGCGCGCATT GGGTGAAGAG
GATCTTGGCC AGGCACTGCG CGAAGCGAAG ACCCCGGAAG ACCTGCTCAA GCTATTGCAG
GGCGCTCCGC AGGAACTGGC GCTCGACGCA CAGATGATCA GCCTCGGCGT ATCGGCCGAC
GATTTTGAAG AACTGGTCTG GCGCGGCGCA CGCCTGTTGC GCAAGGCCGA CTGCGTGAGT
AACGGTTTTG CCGCCGTGCT CCAGCAAGTG GAAGCCTTGT CGCTGGGTGA TGGCCTCTGG
TGGCTGCACA GCGAACAAAC CGTCAAGCGT CCCGGTCTGG CGTTCGTCAC CCCCGACAAA
CCCATGCGTT ATCTGGGCCA GCCGCTGACC GGACTGTTCT GCCTGGCCAG CCTCGGTGAG
GCGCATCAGG CGCTGCTCGA GCGTCTGTGC CTGTTGCTGA TCGAAGGCCG CGGCCACGAG
TTGGGTCATG CCACCAACAG CCGCGCCGTG CTCGAAGCGC TGGGCGGCGA ACTGCCAGCC
GAGTGGCCGA CCCGGCAGAT TCAACTGGCC AACGCCCATG GCTTGCACGC TCGCCCGGCG
AAGATACTGG CGCAGCTGGC CAAGGAGTTT GACGGCGAGA TCCGCATGCG CGTGCTGGAA
ACCGGCGAGG CCGCCGTGTC GGCCAAGAGC CTGAGCAAGC TGCTCAGCCT CGGCGCCCGC
CGTGGTCAGA CGCTGGAATT CATTGCCGAG CCGACCATCG CCGACGACGC ACTGCCAGCC
CTGATCGCCG CCGTCGAGCA AGGTCTGGGC GAGGAAGTCG AACCCTTGCC CGCCGTCTCG
CAGACCGAGG CAGCGCCAGC GCCGGCCCCG GCTGCTGCCA AACCGCTCAG CGCTCCGCCA
GCAGGCAGCG TGTTGCAGGC TGTGTCTGCT TCACCGGGGA TTGCCATGGG GCCGGCCCAC
GTTCAAGTGC TGCAAAGCTT CGATTATCCC CAACGGGGCG AGTCGGTGGC TGCCGAGCGC
GAGCGCCTGC ACAAGGCGAT CGGCGAGGTG CGCAGCGATA TCGAAAATCT TATTCAGCGC
AGCAAGTCCA AGGCCATCCG GGAAATCTTC ATCACCCACC AGGAGATGCT TGAAGACCCG
GAACTGACCA GCGAAGTCGA AGCGCGCCTC AACAACGACG AAAGCGCGGC CGCGGCCTGG
GCCACGGTTA TCGAGACCGC TGCGGTTCAG CAGGAACAAC TGCAGGACGC ACTGCTGGCC
GAGCGCGCCG CAGACCTGCG TGACGTCGGT CGCCGCGTGC TGGCGCAGAT CTGTGGCGTC
GAAACCGTTG CAGCTCCGGA CGAACCCTAC ATTCTGGTAA TGGATGAAGT CGGCCCGTCC
GACGTTGCCC GTCTCGACCC GGCGCAGGTC GCCGGCATTC TTACCGCACG CGGCGGTGCC
ACCGCGCACA GTGCCATCGT GGCGCGTGCG CTGGGCATTC CCGCGCTGGT CGGGGCCGGT
GATGAAGTGC TGCTGCTCAA GCCGGGCACC GTACTGCTGC TCGACAGCCA GCGCGGACGG
CTGACCGTCG CGCCTGACGA GGCGACCCTG CAGCGCGCAG TACAGGACCG TGACGCGCGT
GAGCAACGTC TCAAGGCGGC CGCCGCAGCG CGCATGGAGC CCGCTGTGAC GCGCGATGGT
CATGCCGTCG AAGTCTTCGC CAATATCGGC GACAGCACCG GCACACCGGC TGCCGTGGAG
CAGGGCGCGG AAGGCGTCGG TCTGCTGCGC ACCGAGCTGC TGTTCATGGC GCATTCCCAG
GCGCCGGATG AAGCCACGCA GGAAGCTGAA TACCGCCGCG TGCTGACTGA TCTGGGCGGG
CGTCCGCTGG TGGTGCGTAC GCTGGACGTC GGTGGCGACA AGCCGCTGCC TTACTGGCCG
ATCGCCAAAG AGGAAAACCC GTTCCTCGGC GTCCGCGGTA TCCGTCTTAC CCTGCAGCGT
CCTGATGTCA TGGAAAGCCA GCTGCGCGCC CTGTTGCGTT CGGCAGACAG CGGCCCGCTG
CGCATCATGT TCCCGATGAT CGGCACGCTC GAAGAGTGGC GTCAGGCGCG GGACATGACC
CAGCGCCTGC GCGAGGAAAT TCCGGTCAGC GACCTGCAAC TGGGGATCAT GATCGAAGTG
CCATCGGCTG CGCTGATCGC CCCGGTGCTG GCGAAGGAGG TGGACTTCTT CAGCATCGGC
ACCAATGACC TGACGCAATA CACCATGGCC ATCGACCGCG GCCACCCGAC ACTGTCGGCC
CAGGCTGACG GGCTGCACCC GTCGGTGCTG CAACTGATCG ACATGACCGT ACGCGCAGCG
CATGCCAACG GCAAATGGGT GGGCGTGTGC GGCGAACTGG CTGCAGACCC GCTGGCGGTG
CCGATTCTGG TCGGCCTGGG CGTGGATGAA TTGAGTGTCT CGGCGCGCAG CATTGGCGAG
GTCAAGGCTT GCGTGCGTGA ACTGACCCTG AGCAGCGCTC GGGAACTGGC GCAAAATGCG
CTGACGGCGG GCAGCGCAGC CGAAGTCCGC GCGCTTGTGG AGGCTGTGTA A
 
Protein sequence
MLELTLEQIS MAQSAVDKTA ALKLIADHLV ADGLVAEGYL TGLMNREQQG STFLGQGIAI 
PHGTPETRDL VFTTGVRLMQ FPEGVDWGDG QMVYLAIGIA AKSDEHLRLL QLLTRALGEE
DLGQALREAK TPEDLLKLLQ GAPQELALDA QMISLGVSAD DFEELVWRGA RLLRKADCVS
NGFAAVLQQV EALSLGDGLW WLHSEQTVKR PGLAFVTPDK PMRYLGQPLT GLFCLASLGE
AHQALLERLC LLLIEGRGHE LGHATNSRAV LEALGGELPA EWPTRQIQLA NAHGLHARPA
KILAQLAKEF DGEIRMRVLE TGEAAVSAKS LSKLLSLGAR RGQTLEFIAE PTIADDALPA
LIAAVEQGLG EEVEPLPAVS QTEAAPAPAP AAAKPLSAPP AGSVLQAVSA SPGIAMGPAH
VQVLQSFDYP QRGESVAAER ERLHKAIGEV RSDIENLIQR SKSKAIREIF ITHQEMLEDP
ELTSEVEARL NNDESAAAAW ATVIETAAVQ QEQLQDALLA ERAADLRDVG RRVLAQICGV
ETVAAPDEPY ILVMDEVGPS DVARLDPAQV AGILTARGGA TAHSAIVARA LGIPALVGAG
DEVLLLKPGT VLLLDSQRGR LTVAPDEATL QRAVQDRDAR EQRLKAAAAA RMEPAVTRDG
HAVEVFANIG DSTGTPAAVE QGAEGVGLLR TELLFMAHSQ APDEATQEAE YRRVLTDLGG
RPLVVRTLDV GGDKPLPYWP IAKEENPFLG VRGIRLTLQR PDVMESQLRA LLRSADSGPL
RIMFPMIGTL EEWRQARDMT QRLREEIPVS DLQLGIMIEV PSAALIAPVL AKEVDFFSIG
TNDLTQYTMA IDRGHPTLSA QADGLHPSVL QLIDMTVRAA HANGKWVGVC GELAADPLAV
PILVGLGVDE LSVSARSIGE VKACVRELTL SSARELAQNA LTAGSAAEVR ALVEAV