Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0817 |
Symbol | |
ID | 3366304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 923198 |
End bp | 923746 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637651155 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_233913 |
Protein GI | 66044072 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0889855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.17457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGG ACTCCGCAAG CGGCTGGTGC GACGGCGTGC AGCATTGCCC CTCGCCCAAC TTCAATGCGC GACCCGAAGG CGAGATCTCG CTGCTGGTTA TCCACAACAT CAGCCTGCCG CCAGCGCAGT TCAAGACCGG CAAGGTGCAG GCTTTCTTTC AGAACCAGCT CGACATCGAC GAGCATCCCT ACTTTGTGGG GATTGCCGAT CTGCGCGTTT CAGCGCATTT TCTGATCGAA CGTGATGGCG AGGTCATTCA GTTCGTCTCT TGTCTTGATC GTGCGTGGCA CGCCGGTGTT TCCAGTTTTC AGGGCCGGGA GGGGTGCAAT GACTTCTCTG TGGGCATTGA GCTGGAGGGG ACGGATGACC AGCCTTTCAC TGATGCGCAA TACGACGCGC TGATCGACCT GACGCGACAG TTGCGTCAGG CGTTCGAGGC GATCACCCCC GAGCGTATCT GTGGTCACAG TGACGTGGCG CCGGGACGCA AGACTGATCC TGGGCCCTGT TTTGACTGGG CCAGGTTTCG AGCGGCTTTG CTGGATTGA
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Protein sequence | MQLDSASGWC DGVQHCPSPN FNARPEGEIS LLVIHNISLP PAQFKTGKVQ AFFQNQLDID EHPYFVGIAD LRVSAHFLIE RDGEVIQFVS CLDRAWHAGV SSFQGREGCN DFSVGIELEG TDDQPFTDAQ YDALIDLTRQ LRQAFEAITP ERICGHSDVA PGRKTDPGPC FDWARFRAAL LD
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