Gene Psyr_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0817 
Symbol 
ID3366304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp923198 
End bp923746 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content59% 
IMG OID637651155 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_233913 
Protein GI66044072 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0889855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.17457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGG ACTCCGCAAG CGGCTGGTGC GACGGCGTGC AGCATTGCCC CTCGCCCAAC 
TTCAATGCGC GACCCGAAGG CGAGATCTCG CTGCTGGTTA TCCACAACAT CAGCCTGCCG
CCAGCGCAGT TCAAGACCGG CAAGGTGCAG GCTTTCTTTC AGAACCAGCT CGACATCGAC
GAGCATCCCT ACTTTGTGGG GATTGCCGAT CTGCGCGTTT CAGCGCATTT TCTGATCGAA
CGTGATGGCG AGGTCATTCA GTTCGTCTCT TGTCTTGATC GTGCGTGGCA CGCCGGTGTT
TCCAGTTTTC AGGGCCGGGA GGGGTGCAAT GACTTCTCTG TGGGCATTGA GCTGGAGGGG
ACGGATGACC AGCCTTTCAC TGATGCGCAA TACGACGCGC TGATCGACCT GACGCGACAG
TTGCGTCAGG CGTTCGAGGC GATCACCCCC GAGCGTATCT GTGGTCACAG TGACGTGGCG
CCGGGACGCA AGACTGATCC TGGGCCCTGT TTTGACTGGG CCAGGTTTCG AGCGGCTTTG
CTGGATTGA
 
Protein sequence
MQLDSASGWC DGVQHCPSPN FNARPEGEIS LLVIHNISLP PAQFKTGKVQ AFFQNQLDID 
EHPYFVGIAD LRVSAHFLIE RDGEVIQFVS CLDRAWHAGV SSFQGREGCN DFSVGIELEG
TDDQPFTDAQ YDALIDLTRQ LRQAFEAITP ERICGHSDVA PGRKTDPGPC FDWARFRAAL
LD