Gene Psyr_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0815 
Symbol 
ID3366302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp919536 
End bp920384 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content62% 
IMG OID637651153 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_233911 
Protein GI66044070 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.173751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATT TACGAATTGC CGACCTGACC GCCGAGATCG AGGCCAATGT GCGTCGCGCG 
TTGCTGGAGG ATGTCGGCAG CGGCGATATC ACTGCTCAAT TGATTCCGGC AGAGCGACTG
GCCAAGGCCA CCATCATTTC CCGCGATACA GCGGTGATCG CCGGTACTGC CTGGGTCGAT
GCGGTCTTTC GGCAACTGGA CCCGCGCGTC GCCGTGCACT GGCAAGTGAC CGATGGCGAT
CGCGTCAACC CGAATCAGGC CCTGTTTCAT CTTGAAGGCC CGGCCCGCTC GCTGTTGACC
GGCGAACGCA GCGCGCTCAA TTTCCTGCAG ATGCTCTCGG GAGTGGCCAC GCGGGCGCAG
TACTTCGCGG ACATGGTCGC AGGCACTCAG GTCAAATTGC TGGATACCCG CAAGACCCTG
CCCGGTCTGC GCATGGCGCA GAAATACGCA GTCACCTGCG GCGGCTGTCA TAACCACCGC
ATCGGGCTGT ACGACGCGTT TCTGATCAAG GAAAACCACA TCGCAGCCTG TGGCGGCATC
GCCCAGGCAG TGGAAGCGGC ACACCGGATT GCACCCGGCA AGCCTGTGGA AGTCGAGGTG
GAGAGCCTGG GTGAACTCAA GCAGGCGCTG GACGCAGGCG CCGACATCAT CATGCTCGAT
GAATTGAGCC TTGATGACAT GCGCGAGGCC GTGCGCCTCA CCGCGGGCCG TGCCAGTCTG
GAAGCCAGCG GCGGCATCAA CGACGATACC CTGCGGGTGA TTGCCGAAAC GGGTGTCGAT
TACATTTCCA TCGGTGCGAT GACCAAGGAT GTGAAAGCCG TGGACCTGTC CATGCGCCTG
AGCCTCTGA
 
Protein sequence
MPNLRIADLT AEIEANVRRA LLEDVGSGDI TAQLIPAERL AKATIISRDT AVIAGTAWVD 
AVFRQLDPRV AVHWQVTDGD RVNPNQALFH LEGPARSLLT GERSALNFLQ MLSGVATRAQ
YFADMVAGTQ VKLLDTRKTL PGLRMAQKYA VTCGGCHNHR IGLYDAFLIK ENHIAACGGI
AQAVEAAHRI APGKPVEVEV ESLGELKQAL DAGADIIMLD ELSLDDMREA VRLTAGRASL
EASGGINDDT LRVIAETGVD YISIGAMTKD VKAVDLSMRL SL