| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0813 |
|---|
| Symbol | |
|---|
| ID | 3366300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 917624 |
|---|
| End bp | 918202 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637651151 |
|---|
| Product | stress protein |
|---|
| Protein accession | YP_233909 |
|---|
| Protein GI | 66044068 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.492413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.641947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTAA GTCTGAGTAA AGGCGGCAAC GTTTCCCTGT CCAAAGAGGC TCCGGGCCTG
ACAGAAATCA CCGTAGGCCT GGGCTGGGAT CCGCGTGTGA CCGATGGCAC CGAGTTTGAC
CTGGATGCTT CGATCTTCAT CGTTGGCGAA AATGGCAAAG TGCTGGACGA CAACAGCTTC
ATTTTCTACA ACAACAAGAA GTCGGCTGAT GGTTCGGTCG AGCACCTGGG CGATAACCGT
TCCGGTGCTG GCGAAGGCGA TGACGAGTCG GTAACGGTCA AGCTCACTGG CCTGGCAGCC
GCAGTGAAGA AGCTGGTTTT CGCGGTCACC ATCCACTCCG CCGAAGAGCG CAAGCAAAGC
TTCGGCCAGG TTTCCAACGC TTACATCCGC GTTGTGAACA AGGCTGACGG CAAGGAAATC
GCTCGTTACG ACCTGTCGGA AGATGCATCG ACCGAAACTG CGATGATCTT CGGCGAGCTG
TATCGCAATG GCGAAGAGTT CAAGTTCAAA GCCATTGGCC AGGGCTTTGC CGGCGGTCTG
AAGCCGTTGG CAGAAGCTCA CGGCGTGGCA ATCGGCTAA
|
|---|
| Protein sequence | MAVSLSKGGN VSLSKEAPGL TEITVGLGWD PRVTDGTEFD LDASIFIVGE NGKVLDDNSF
IFYNNKKSAD GSVEHLGDNR SGAGEGDDES VTVKLTGLAA AVKKLVFAVT IHSAEERKQS
FGQVSNAYIR VVNKADGKEI ARYDLSEDAS TETAMIFGEL YRNGEEFKFK AIGQGFAGGL
KPLAEAHGVA IG
|
|---|
| |