Gene Psyr_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0809 
Symbol 
ID3366296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp914252 
End bp915421 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content59% 
IMG OID637651147 
Productstress protein 
Protein accessionYP_233905 
Protein GI66044064 
COG category[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
[COG4110] Uncharacterized protein involved in stress response 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.616867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAC TTGTCCCGGG CGCCAACGCG CCGGTCGCTG CCGGTCCGCT GACGGTGGAA 
ATTATTTACT CTCCGCTCGC GGACGCTGAT ATCGATGTGT CTGCGTTCCT GCTGACCAGT
TCGGGCAAGG TCCGTGGCGA TCAGGACATG TGTTTCTACG GCCAGAAAAG CGTGAACGGC
GGTGCGTTGC AGCAGACGGA AGCCTCAGCC GGACGCGCGG TATTCAGTCT TGACCCGAGC
CGTCTGGATT CGGTCATCGA GAAGGTTGCC CTGACGGCGA CCATCTATGA GAACAAGGCC
AGTTTCGGCA GCGTGTCACG CCTGGCATTG AGCATCACCG GCGGTATCGA AGCCGATATC
CCGACCAGCG GCATGAAAGA AACCGCGCTG ATTCTGGGCG AGTTCTACCT GCGTCAGGGT
GCCTGGAAAT TCCGTTGCGT GGCCCAGGGT TTTGCCGGCG GCCTTGAGCC GTTGGCGAAA
AACTTCGGTG TTGAAGTCGC TGCGCCGCAG GATCAGCCTG CACCTGCACC TGTTCCCGCG
CCTGCACCGA AGTCGACCGT CAGTCTGAGC AAGATCACGC TCGACAAGAC CCGTGCGTCG
ATCAGCCTGG AAAAATCCAG TGCCGGTTTC GGTGAGATTC GGGTCAACCT GAACTGGAAC
CGTCGTAACG ACAGCAAGGG CGGCGGCTTC TTCTCTATGA AGAAGAGTAA TGCCATCGAC
CTTGATGTAG GCTGCCTCTT CGAAATGCAG GACGGTCTCA AAGGCGCTGT TCAGGCGCTG
GGCAACTCGT TCGGTTCGCT CAACACCGAG CCTTTCATCA AGTTGATGGG CGATGACCGT
ACCGGCTCGA TCAGCGACGG TGAGTGGCTG CATATCAATG GCGCGCACTG GAGCAAGATC
CGTCGCATTC TGGTCTACGC GTTCATCTAT GAAGGTGCGC CGAACTGGAA GGAAACCGAC
GGGGTGGTCA CCATTCACGC GCCGGGCCAG CCGCCCATCG AGGTTCGCCT CAATGAAGAG
GGCGGTCGTC AGGGCATGTG TGCCATTGCC CTGCTGGAAA ATGACAACGG TGCGGTCAAG
GTGACGCGTC GCGTGGATTT CCACAACGGC CACAGCAACA TGGATAAAGC CTACGGCTGG
GGCATGCGCT GGGCTGCCGG TTCCAAGTAA
 
Protein sequence
MTQLVPGANA PVAAGPLTVE IIYSPLADAD IDVSAFLLTS SGKVRGDQDM CFYGQKSVNG 
GALQQTEASA GRAVFSLDPS RLDSVIEKVA LTATIYENKA SFGSVSRLAL SITGGIEADI
PTSGMKETAL ILGEFYLRQG AWKFRCVAQG FAGGLEPLAK NFGVEVAAPQ DQPAPAPVPA
PAPKSTVSLS KITLDKTRAS ISLEKSSAGF GEIRVNLNWN RRNDSKGGGF FSMKKSNAID
LDVGCLFEMQ DGLKGAVQAL GNSFGSLNTE PFIKLMGDDR TGSISDGEWL HINGAHWSKI
RRILVYAFIY EGAPNWKETD GVVTIHAPGQ PPIEVRLNEE GGRQGMCAIA LLENDNGAVK
VTRRVDFHNG HSNMDKAYGW GMRWAAGSK