| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0808 |
|---|
| Symbol | |
|---|
| ID | 3366295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 913662 |
|---|
| End bp | 914255 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637651146 |
|---|
| Product | stress protein |
|---|
| Protein accession | YP_233904 |
|---|
| Protein GI | 66044063 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.343161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCA CTTTGGCAAA GAACCAGACG ATCTCACTCG AGAAAACTGC TGGTACAGGC
CTCAAGAAAG TCAGCATGGG ACTTGGATGG GACCCTGAAA AAGCCAGTGG TTTCTTCGGA
AAATTGCTCG GTGGTGGCGG TGGCGACATC GACCTTGATG CCTCGTGCAT CATGCTTGAC
GCTGCCAAAG GACGCCTCGA TCTGGTCTGG TTTCGCCAAC TGCAATCGCT TGACGGTGCC
ATTCAGCATT CGGGTGACAA CCGGACCGGC GAAGGCGCGG GCGACGATGA AACCATCAGC
GTCGATCTGG AAAAACTGCC TGCCAACGTC AAATACCTGG TGTTCACCGT CAATTCGTTC
ACCGGTCAGA ATTTCGAAAA AGTCGCCAAT GCCTACTGCC GTATTGTCGA TCTGGGCGGC
CGTAATGAAC TGGGCCGCTT TGATCTGTCC GAAAAAGGCC AGCACACCGG CGTGGTGATG
TCCTACCTGA CGCGCACGCC ATCGGGCTGG GATTTCACCG CAGTCGGCCA GGTCACCAAC
GGTCGCACTG CTGATGATCT GGTCGAGCTG GCGATCGGGG CTATACGCGT ATGA
|
|---|
| Protein sequence | MALTLAKNQT ISLEKTAGTG LKKVSMGLGW DPEKASGFFG KLLGGGGGDI DLDASCIMLD
AAKGRLDLVW FRQLQSLDGA IQHSGDNRTG EGAGDDETIS VDLEKLPANV KYLVFTVNSF
TGQNFEKVAN AYCRIVDLGG RNELGRFDLS EKGQHTGVVM SYLTRTPSGW DFTAVGQVTN
GRTADDLVEL AIGAIRV
|
|---|
| |