| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0786 |
|---|
| Symbol | |
|---|
| ID | 3366273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 892574 |
|---|
| End bp | 894691 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637651124 |
|---|
| Product | CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt |
|---|
| Protein accession | YP_233882 |
|---|
| Protein GI | 66044041 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.380059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTATTA ATCTCGATCA GGCACAGCAG ACGTTCATCG TTGAAGCGCG AGAGCTTTTG
CAGGCCATGG AGGAATCCCT CCTGCAACTC GAAAGCGAGC CCGGCGACCT GGACGCGATC
GGCGCGGTCT TCCGCGCAGC GCACACCATC AAAGGCTCGG CCGGACTGTT CGGGCTGACG
CCTATCGTCA GTTTTACTCA CATCGTCGAA GACGTGCTGG ATCGTCTGCG TGAAGGCAGT
GTTTCGGTAA ACGCCGAGCT GATCGCCGTG CTGCTCAAAT CCGGCGATCA CATGCTTGAG
TTGATCGACG TGGTCGCCAG CCGTGGCGAG CAACTGCAGC AGCCTGCACT GGAGCGCGAG
GCAGCGCTGC GTCAGGCGTT GCAGGTCTTC CAGGCACCGG CCAGCGCCAG CGCCGCTGAC
ATCGCAAGTG CGCAGGTCGT CAGCGATGAT GAACAGTCAG CCGACGTGCT CTGGCATATC
TCGCTACGTT TTGGCGTGGA TGTGTTTCGC AACGGCATGG ACCCGCTGTC GTTCCTGCGC
TACCTCAATA CCCTGGGGCA GATGGTCCAG GTCACGACGC TGACCGACAG CATTCCAACA
GTTGAAGCGT GGGACCCGGA ATCCTGCCAC CTGGGCTTCG AGATCGATTT CCGCTCTGCT
GCCGGGCACG CCGCGATCAA CGAAGTCTTC GATTTCGTGC GTGAAGACTG CGCGGTGGAA
ATCACGCCGC TGGACGAAAC GCCAGACCAC GTCGAGCCCA CCGGCACCGA ACTGGTCTCG
CAGCCCGAAC ACAGCCCTGT GGTGGCCAGC GGCGAACTGC TGGGCGATCA GCGCGCAGTG
CCACGTACGC CCGCAACGGC AACGGCAACG GCAACCGCTG TAGAGCGCCC TTCTTCGGGC
AGCGAGCAGA AAAACAAGGA TGGCCGCTAT GTGCGCGTCA ACGCCGACAA GCTCGACGAG
CTGATCAATC TGGTCGGCGA GCTGGTCATT GCCAGCGCCG GCGCCAGCCT GCTGGCCAAG
TCGTGCGACA ACGACCCGCT TCAGGAAGCC AGCTCGACGG TGTCGGGGCT GGTCGAGCAG
ATTCTGGATG GCGCGCTGCA CCTGCGCATG ATCCCGATCG GCGACACCTT CAATCGCTTC
CGCCGAGTGG TGCGCGATGT CAGTCAGGAA CTGGGCAAGG ACATCGACCT GATTATCAAT
GGCGCGGAGA CCGAACTGGA CAAGACCGTC GTCGAAAAGA TCGGCGACCC GCTCATGCAC
CTGCTGCGCA ATTCCATGGA TCACGGCATC GAGAGCGCCG AAGCGCGTCG CGCGGCGGGC
AAGCCGGCCA AAGGTCATTT GAGCCTCAAT GCGTACCACG ACTCGGGCAG CATCGTCATC
GAAATCGCCG ACGACGGGGC CGGACTCAAC CGCGAGCGCA TCCTCGACAA GGCCCAGCAA
CGCGGACTGG TGGCGGCCGG CGCAAGCCTC ACCGATCAGG AAATCTACAA CCTGATTTTC
GAGCCCGGCT TTTCCACTGC CGAGGCCGTC ACCAACCTTT CGGGGCGTGG TGTCGGCATG
GACGTGGTCA AGCGCAACAT TACCTTGCTG CGCGGCACGG TGGATCTGGA CAGTCAGCCC
GGTCAGGGCA CCATCGTGCG CATCCGCTTG CCGCTGACGC TGGCGATCAT CAACGGCTTT
CTGGTCGGTA TCGATCAGTC GACTTACGTG ATCCCGCTGG ACATGGTGCA GGAATGCATC
GAGCTGGACG AACACAACCG GCAGTTGACC CGCGACAGCG GCTACCTGGA CCTGCGTGGC
GAAGTGCTGC CGCTGGTCTA CCTGCGCGAC CACTTCAATC ATGAAGGCCC GGCCGCCAGG
CGCCAGAACG TGGTGGTGGT GCGTTACGCC GAGCACAAGG CCGGGCTGGT GGTCGATGAC
CTGCTGGGCG AGTTCCAAAC CGTTATCAAA CCTCTGGGCA AGCTGTTCGG CGCGCTGCGC
GGCATCAGCG GCTCGACGAT CCTGGGCAGT GGCGCGGTGG CGTTGATTCT CGACATTCCC
GCCCTGCTCA ACCAGATCGT ACACATGGAG GCCCGCTCGA CCCAGGCGCC TCAATTCCTG
CTGCCCACTT CTCGCTGA
|
|---|
| Protein sequence | MSINLDQAQQ TFIVEARELL QAMEESLLQL ESEPGDLDAI GAVFRAAHTI KGSAGLFGLT
PIVSFTHIVE DVLDRLREGS VSVNAELIAV LLKSGDHMLE LIDVVASRGE QLQQPALERE
AALRQALQVF QAPASASAAD IASAQVVSDD EQSADVLWHI SLRFGVDVFR NGMDPLSFLR
YLNTLGQMVQ VTTLTDSIPT VEAWDPESCH LGFEIDFRSA AGHAAINEVF DFVREDCAVE
ITPLDETPDH VEPTGTELVS QPEHSPVVAS GELLGDQRAV PRTPATATAT ATAVERPSSG
SEQKNKDGRY VRVNADKLDE LINLVGELVI ASAGASLLAK SCDNDPLQEA SSTVSGLVEQ
ILDGALHLRM IPIGDTFNRF RRVVRDVSQE LGKDIDLIIN GAETELDKTV VEKIGDPLMH
LLRNSMDHGI ESAEARRAAG KPAKGHLSLN AYHDSGSIVI EIADDGAGLN RERILDKAQQ
RGLVAAGASL TDQEIYNLIF EPGFSTAEAV TNLSGRGVGM DVVKRNITLL RGTVDLDSQP
GQGTIVRIRL PLTLAIINGF LVGIDQSTYV IPLDMVQECI ELDEHNRQLT RDSGYLDLRG
EVLPLVYLRD HFNHEGPAAR RQNVVVVRYA EHKAGLVVDD LLGEFQTVIK PLGKLFGALR
GISGSTILGS GAVALILDIP ALLNQIVHME ARSTQAPQFL LPTSR
|
|---|
| |