Gene Psyr_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0777 
Symbol 
ID3366264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp881642 
End bp882655 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content64% 
IMG OID637651116 
ProductLacI transcriptional regulator 
Protein accessionYP_233873 
Protein GI66044032 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.185303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC CCGTAACGCT CAAGGATGTT GCCAACCATG CAGGTCTTTC CAAGGCTGCG 
GTGTCGCGCT ATCTGAACCG AAGCATCAGC CTGCCGCCGG AAACCGCGCA ACGTATCGAC
CTGGCGATCA AGGCGCTGGA CTACCGGGGC AACAGTCTGG CCCGGCGCCT GAGCAAAGGC
GGCAGTGAGA CCATCGGCCT GGTGCTGCCG GACATCGCCA ACCCGTTTTT CGCCGAGCTG
GCAGACGCGG CCGAGGAAGA GGCGTCCGCA CACGGTTATA ACCTGGTGCT GTGTGTCACC
CGCAACCTGC TTGAGCGCGA AAGCACGTTT GTGCGTTGGC TGGATTCACG TAACGTCGAT
GGCTTGCTAC TGGTCAGCAA CCGCCCGGAT GACGGCACGC TGGCCAGCCA GCTGATGAGC
TACCGCAATA TCATTCTGCT CGACGAAGAC GTTCCCGGCA CGTCGCAGCC CAAAGTCTTC
GCCGACAACC ATCAGGGCGG TCGCCTGGCG ACTGACTATC TGATCCGCCA TGGCCATCGA
CGCATCGCTC ATGTGTCCGG GCCGTCGGCC TTGATGAGTG CTCGCGAGCG CTATGCCGGC
TACCGGGAAG CGCTCGCGCT GGCGAGCATC GCAGAGGTGC CGGAATACCT GTGCTTTGGG
GATTACAGCC GTGAGTTCGG GCGTATCGCG ACCGCACAGC TACTCACCCT GCCCGACCCT
CCGGAGGCGA TTTTCGCCGC CAGTGACTTC ATCGCCCTGG GCGTGCTCGA TGTCCTGCGT
GAGCGCACTA TCAGCGTGCC CGGTGCCATG TCGCTGGTGG GTTTCGACGA CGCCGTCTAC
GCCAGCCTGC TGACCCCGCC GCTGTGTACC ATCCGCCAAT CCTCCAGAGA GCTTGGCCGT
CTCGGCGTGG CGCAACTGCT GCAGAGGATG ACGGGCGGCG ACTGTGCGCA GGACATCGTG
CGCGTACCCG TAGAGCTGGT CTGTCGGGGC ACGGTAGCAA CGCGCAGTGA CTGA
 
Protein sequence
MTRPVTLKDV ANHAGLSKAA VSRYLNRSIS LPPETAQRID LAIKALDYRG NSLARRLSKG 
GSETIGLVLP DIANPFFAEL ADAAEEEASA HGYNLVLCVT RNLLERESTF VRWLDSRNVD
GLLLVSNRPD DGTLASQLMS YRNIILLDED VPGTSQPKVF ADNHQGGRLA TDYLIRHGHR
RIAHVSGPSA LMSARERYAG YREALALASI AEVPEYLCFG DYSREFGRIA TAQLLTLPDP
PEAIFAASDF IALGVLDVLR ERTISVPGAM SLVGFDDAVY ASLLTPPLCT IRQSSRELGR
LGVAQLLQRM TGGDCAQDIV RVPVELVCRG TVATRSD