| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0771 |
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| Symbol | |
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| ID | 3366258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 875599 |
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| End bp | 876741 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637651110 |
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| Product | peptidase M20:peptidase M20 |
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| Protein accession | YP_233867 |
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| Protein GI | 66044026 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.216529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGATG ACCCTATAGC CCTGACCCGA GCCCTGCTGG CGTTCCAGAC CCTCAACCCG
CCGGGCGATG AAGAAGCGTG TGCGGCTTTT CTTGCCGAGC AGCTGACCCG CCACGGATTT
GTCTGCGAGC TGCAGCGTTT CGGTGAGCGC CGTTTCAATC TGGTCGCCTG GCTTGAGGGC
GACGGCCCCG GCAAACCGCT GGGGTTCACC GGCCACCTGG ATACCGTGCC GCTCGGCAAT
GCCACCTGGA GTCACTCGCC GTTTGCCGGT GAGATCGTCG ATGGCCGGCT GTACGGGCGA
GGGTCCAGCG ACATGAAAGC GGGCATTGCC GCCTTCATCG TGGCCTGCCA GCGCAGCCGT
GATTCCATTC GGCGCGGGCC CGGCGTTCGT CTGATACTCA CCGGCGGAGA GGAAACCGGC
TGTGACGGCG CCAAGGCCCT GTGCAGTGAC GCGCCCCATT TGCTTGGCGA ACTGGGCGCA
CTGCTGATCG GAGAGCCGAC GGCCAACTAC CCGATACTCG GACACAAAGG CGCGTTATGG
CTGTGCTGCG CCAGCCATGG CCTGACGGCC CACGGAGCGA TGCCGGAAGA AGGCGTGAAC
GCTATCTATC TGGCCGCCGA ACACATTGGC CGCGCACAGA CCTTTGAAGT AGGCCCCGCG
CATCCGCTCA TGCGCAAGCC GACGCTGAAC GTCGGCACTA TCAGCGGCGG TCTGAACATC
AACTCGGTGC CGGACTACGC AGCGTTCACC CTGGACCTGC GCACTGCACC GAATCTGGAC
CACGACGAGA TTCGCGGACG ACTGGCGGCC CATCTGGGCA GCAGCGCGGA ACTGAGCACC
CTGATTGATC TGCCTGGTAT CTGTGCCAGC CCCGACGAGC CTTGGGTGCA ACAGGTTTTT
GCACGCTGTC AGGCCTTGCA TGACGCCCCT CTGGAGGAAA AGGCGGTGCC CTACTTTACC
GATGCCGCGG TGCTGCTCCC CGCCATCGGC TATCCGCCCA CCCTTATTCT CGGCCCGGGA
GAGCCCGGCA TGGCGCACAA GGTCGATGAG TATTGTGAAG TCGACAAACT TCAGCAATGC
GTCGAACTGT ATGCCGGATT GATCGAAGAC TGGACAGTCA TGCACGCGCC GATGAACGAC
TGA
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| Protein sequence | MLDDPIALTR ALLAFQTLNP PGDEEACAAF LAEQLTRHGF VCELQRFGER RFNLVAWLEG
DGPGKPLGFT GHLDTVPLGN ATWSHSPFAG EIVDGRLYGR GSSDMKAGIA AFIVACQRSR
DSIRRGPGVR LILTGGEETG CDGAKALCSD APHLLGELGA LLIGEPTANY PILGHKGALW
LCCASHGLTA HGAMPEEGVN AIYLAAEHIG RAQTFEVGPA HPLMRKPTLN VGTISGGLNI
NSVPDYAAFT LDLRTAPNLD HDEIRGRLAA HLGSSAELST LIDLPGICAS PDEPWVQQVF
ARCQALHDAP LEEKAVPYFT DAAVLLPAIG YPPTLILGPG EPGMAHKVDE YCEVDKLQQC
VELYAGLIED WTVMHAPMND
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