Gene Psyr_0767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0767 
Symbol 
ID3366254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp872972 
End bp873892 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content63% 
IMG OID637651106 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_233863 
Protein GI66044022 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.342253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATT TGAAATTGAT GCGTCAGTAC GTGGTGGTCG CTGAAACCTT GAATTTTCGC 
AAGGCCGCGC AGCGCTTGAA CATGTCACAG CCGCCCCTGA GCGTTGCGAT TCGTCGTCTG
GAAGAATGCC TGGGTGTGCA GTTGTTGCAG CGCAGTACGC GCTCCACGCA ACTGACCGCC
GCGGGCGTGG TGTTTCTGGC CGAGGCTCGG CAGACGCTGC TGCAGGCCGA ACGGGCCTGC
GAAATGGCAC GTCGCTCAGC GGCAGGCATG CTCGGCACGA TTCGCCTGGG CTTTGTCGAC
AGCGTGGTCG ATGGTTTGCT GCCGGCGCTG CTGCGTCGCT ATCAGGCAGC GAACCCGAAC
GTCGATATTC AACTGCAGGA GGCCACCCCA CCCGAGCAGC TTGAAGGCCT GCGCAATGAG
CGGCTGGACG TCGGCATTCT GGTATTGCCG GTCATCGACC CGGGCACTAT TCATATCGAG
CCGCTGTTCG AGGACCGCAT GGTCGCGGTG CTGCCGCAGG ATCATCCCTT GGCCGAGCAG
ACATCCATCG GTCTTGCGGC GTTGGCAGAC CAATCCTGGA TTCTGTTCGC CCCGCATCAT
GGCCCGGGCA TGCACTCGCA CATTCTGCTG GCCTGCGCCA GTGCAGGCTT TACCCCTCGG
GTCGTGCAAC AGCCTCGCCA GATGCAGACC ACGGCCGCGC TGGTCGCCGG AGGAATGGGT
GTGGCGCTCA TGCCGCAGCG CTATGCCCGA CGTCAGCCTG GGCGGCTGGC GTGTCGGGAG
ATAACTGGGC CAGGCACACC TGTTGCCTAT GTGCTGGCGC TGGCGTATCG CGAGTTGTCT
CCGTGTGCGC AGTCATTGCG CGAAGTGATC ATGGAGCTGG TTCAGTCGCC GGCGTTCAGG
CTGTCGTCCG CTGAGTCATG A
 
Protein sequence
MIDLKLMRQY VVVAETLNFR KAAQRLNMSQ PPLSVAIRRL EECLGVQLLQ RSTRSTQLTA 
AGVVFLAEAR QTLLQAERAC EMARRSAAGM LGTIRLGFVD SVVDGLLPAL LRRYQAANPN
VDIQLQEATP PEQLEGLRNE RLDVGILVLP VIDPGTIHIE PLFEDRMVAV LPQDHPLAEQ
TSIGLAALAD QSWILFAPHH GPGMHSHILL ACASAGFTPR VVQQPRQMQT TAALVAGGMG
VALMPQRYAR RQPGRLACRE ITGPGTPVAY VLALAYRELS PCAQSLREVI MELVQSPAFR
LSSAES