Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0767 |
Symbol | |
ID | 3366254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 872972 |
End bp | 873892 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651106 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_233863 |
Protein GI | 66044022 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.342253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATT TGAAATTGAT GCGTCAGTAC GTGGTGGTCG CTGAAACCTT GAATTTTCGC AAGGCCGCGC AGCGCTTGAA CATGTCACAG CCGCCCCTGA GCGTTGCGAT TCGTCGTCTG GAAGAATGCC TGGGTGTGCA GTTGTTGCAG CGCAGTACGC GCTCCACGCA ACTGACCGCC GCGGGCGTGG TGTTTCTGGC CGAGGCTCGG CAGACGCTGC TGCAGGCCGA ACGGGCCTGC GAAATGGCAC GTCGCTCAGC GGCAGGCATG CTCGGCACGA TTCGCCTGGG CTTTGTCGAC AGCGTGGTCG ATGGTTTGCT GCCGGCGCTG CTGCGTCGCT ATCAGGCAGC GAACCCGAAC GTCGATATTC AACTGCAGGA GGCCACCCCA CCCGAGCAGC TTGAAGGCCT GCGCAATGAG CGGCTGGACG TCGGCATTCT GGTATTGCCG GTCATCGACC CGGGCACTAT TCATATCGAG CCGCTGTTCG AGGACCGCAT GGTCGCGGTG CTGCCGCAGG ATCATCCCTT GGCCGAGCAG ACATCCATCG GTCTTGCGGC GTTGGCAGAC CAATCCTGGA TTCTGTTCGC CCCGCATCAT GGCCCGGGCA TGCACTCGCA CATTCTGCTG GCCTGCGCCA GTGCAGGCTT TACCCCTCGG GTCGTGCAAC AGCCTCGCCA GATGCAGACC ACGGCCGCGC TGGTCGCCGG AGGAATGGGT GTGGCGCTCA TGCCGCAGCG CTATGCCCGA CGTCAGCCTG GGCGGCTGGC GTGTCGGGAG ATAACTGGGC CAGGCACACC TGTTGCCTAT GTGCTGGCGC TGGCGTATCG CGAGTTGTCT CCGTGTGCGC AGTCATTGCG CGAAGTGATC ATGGAGCTGG TTCAGTCGCC GGCGTTCAGG CTGTCGTCCG CTGAGTCATG A
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Protein sequence | MIDLKLMRQY VVVAETLNFR KAAQRLNMSQ PPLSVAIRRL EECLGVQLLQ RSTRSTQLTA AGVVFLAEAR QTLLQAERAC EMARRSAAGM LGTIRLGFVD SVVDGLLPAL LRRYQAANPN VDIQLQEATP PEQLEGLRNE RLDVGILVLP VIDPGTIHIE PLFEDRMVAV LPQDHPLAEQ TSIGLAALAD QSWILFAPHH GPGMHSHILL ACASAGFTPR VVQQPRQMQT TAALVAGGMG VALMPQRYAR RQPGRLACRE ITGPGTPVAY VLALAYRELS PCAQSLREVI MELVQSPAFR LSSAES
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