Gene Psyr_0763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0763 
Symbol 
ID3366250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp869019 
End bp870596 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content60% 
IMG OID637651102 
Productporin, LamB type 
Protein accessionYP_233859 
Protein GI66044018 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4580] Maltoporin (phage lambda and maltose receptor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00125923 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.916374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACG CATCAAGATG GCTACTCGCA GGGGTACTCG GCACCTCGAC AACCGTCTCT 
CAGGCCGCGA CGCTGGAAGA ACGGATGGCC GCTTTTGAAG CCCGTGCCAG CGCTGCGGAA
AAACGTGCAG CCGCAGCCGA ACAGCAAACC CAGGCGCTCG CCAGGGAACT GCAGCAACTC
AAACTCGCCA CCCCCGCTGC GCAGCCTGCC GCGCCCACTT CCGCGCCGAC TGTGGCAGCC
AGTCCACAGC CCGCTCTGGA TGATCGCGTA GCAAAACTCG AAGCCCGCCA GCAAAGCATG
GAGAAGCCAG GCGGTGTCGG ACACCTCACC GACGGGTTCA GCTTCAAGGG CTATGCTCGC
TCCGGCCTGT TGATCAACGA CGGATTGGGC GGCGGTCGCG GCGGGCCTTA TACAACCCCC
GCGGGTTCAG TCGGTGGGGC GGTCGGGCGC CTCGGTAACG AAGACGACAC CTACATGCGC
TTCGATCTGT CGAAAGAGAT CTACGCGCAG AACGGCACGC GCTCCAAGTT CACCGTCTCC
ATCGCCGATG GCGTTGAAAG CTATAACGAC TGGACACCCA CCGAAAGCAG CCTGAACGTG
CGTCAGGTAT TTACCGAACT CGACCACATC GCCGCCTTCA AGGGTAATTC AGTGTTCGAG
AACTCCACCC TGTGGGCCGG CAAGCGCTTC GACAGGGATA ATTTCGATAT CCACTGGCTG
GACTCGGACG TGGTCTTTCT GGCCGGGACC GGTGGCGGTA TCTACGATGT GCAGATGACC
AGGGACTGGC GCTCGAACTA CTCCCTGATC GGACGTAACT ACGGAGATTT CAGTGAGGGC
GGCGTCGATG CCGATGTGGA AAGCTACATC CTGACCTCCA ACCAATTCTT CGACAATGGT
CAGTGGCAGT GGATGTTCAA CGCTATTGGC GCAAGGAAAA ACGACGTCGG TACGCGCACC
AATCAAGCCG GTTTTGCACC CGCAGATTCA GGCCTGCACA CCATGTTGGC CAATCACCAG
AAAGACTTTT TCGGCCGCGA AGGCTTCTTC AAGACGGCGT TGCTCTATGG GCAGGGCCTG
GGTGCACAGG TCAAGGACAT CGGCGCCGAT GGCGAACTGC TCGACGACGC CCGCGCGGTG
CGTCTGGCCA TGTATGGCGA GACGCCTATC GCGCCGGGAT GGCGCATCGG CCCGAGCCTG
CTGGCCGAGC AGAGCAAGGA CCGCTACGTC AAAGGCGACG ATTACCGCTG GCTCACGCTG
AACATGCGCC TGGCCAACGA GATCAACAGC AACTTCGAGA TGGCCTACGA GCTGAGTTGG
CAAACCATGG ACCTCGACCC CAAAGGCTAC CTGCAACGCA ATGCCGTCGA TGGTAACTTC
TGGAAGTTTA CGGTGGCGCC GACCTTCAAG CCGGACATGG GTGACCTGCT CACGCGTCCC
GAACTGCGAG TGTTCGCAAG CCTCATGAAC TGGTCTTCGG ACCTGGACCG CTACAGCACG
ACCGGCAACT TCGGCAAAAG CGACTTCAAT TCCGGTGGTG TTTGGCAGTT AGGTATCCAG
ATGGAGACCT GGTTCTAG
 
Protein sequence
MQNASRWLLA GVLGTSTTVS QAATLEERMA AFEARASAAE KRAAAAEQQT QALARELQQL 
KLATPAAQPA APTSAPTVAA SPQPALDDRV AKLEARQQSM EKPGGVGHLT DGFSFKGYAR
SGLLINDGLG GGRGGPYTTP AGSVGGAVGR LGNEDDTYMR FDLSKEIYAQ NGTRSKFTVS
IADGVESYND WTPTESSLNV RQVFTELDHI AAFKGNSVFE NSTLWAGKRF DRDNFDIHWL
DSDVVFLAGT GGGIYDVQMT RDWRSNYSLI GRNYGDFSEG GVDADVESYI LTSNQFFDNG
QWQWMFNAIG ARKNDVGTRT NQAGFAPADS GLHTMLANHQ KDFFGREGFF KTALLYGQGL
GAQVKDIGAD GELLDDARAV RLAMYGETPI APGWRIGPSL LAEQSKDRYV KGDDYRWLTL
NMRLANEINS NFEMAYELSW QTMDLDPKGY LQRNAVDGNF WKFTVAPTFK PDMGDLLTRP
ELRVFASLMN WSSDLDRYST TGNFGKSDFN SGGVWQLGIQ METWF