Gene Psyr_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0749 
Symbol 
ID3366236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp851745 
End bp853283 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content56% 
IMG OID637651088 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_233845 
Protein GI66044004 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCA AGGACACCCT CCTTCAGGCG GTGAAGGCTT TCGGCGACCG CCCGGCAGTA 
TGCGATGGAG AGCGCAGTCA TAGCTATCAG CAGGTATGGA CACGTGCCTG CCGCTTGGCT
AACGGCTTGT TGGCTTGGGG CTTTGAACCC GGAACACGAG TGGCAGTGCT GGAAGATAAC
AGCATCGAAT CCTTGGATGT GGTTGTGGGG CTTGCTATTG CTGGATTTGT GCGAGTACCA
CTATATGCCG GTAGCGCTCT GGCCATTCAG ATGAATATTG TCGAGCATAC GAACTGCCAA
GCGTTGATTG TCTCGCCGGC CCACGCTGAC ACCGCAAGGG AAATGCATCG GCAAGACCCC
AAGCTGCGGC TGCTGACCTA CGGCGCCAGC TACGAGACCT GGCTCGCTTC AGCAGATGAT
AGCGACCCGA ACATCAACGT CTCCGATGAG GATCTGTTCA TCATCCGCCA CAGCGGTGGC
ACCACCGGAG TACCAAAAGG TGTGCCCATC AGTCACAGGA CGTGGCTCTA CTCAATTTAC
GAGTGGTCAT ATAGTCTGCC ACCCCTGAGC CCTAGTGATG TGTTCCTCCA GGTAAGCCCG
CTGTCCCACG GGGCCGGCTA CCTATTGCTA CCCACTTGGA TCGCAGGGGC CTGCACCTTA
GTCAGACCCG CTTTCGATGC GGCCGACTGT CTGCAATGTC TCACCAAGTA TCGGGTCACC
TACAGCTTCT TCGGACCCGC AGACCTCAAC GCGCTGACCC GCTTCGCTTC CGCAGCCGCA
GTACCGCCGC AAAACTGGCT CAAGGCTGTG ATCACCGGCG GGTCACCCAT CGCTGAGTCC
ACTATCCGCC GTCTGCATAA ATGTTTTGGG CAAGTTCTGT ATCAATATTA TGGTCAGGTC
GAGGCGGGTA TAATCAGTGT GATGCCGCCC CTGAACCTCG ATGAGGTGTC CCTGGGTGAT
AGCCGCCTGC AGTCTTGTGG CCGACCTCGC CACGATGTGC AGGTCTGCGT ACTGGATGAT
GCCTGCGAAG CGCTACCCCC AGGTCAAGTC GGTGAGATTG CAATTCGTGG CCATGGTGTG
ATGTCAGGAT ATTGGAAAAA TCCACAGAAA ACTGCGACCA AGTTCAATCA GGGCTGGCTG
CTGACTGGCG ATCTCGGCCG CATCGATGAA CAACACTACC TTTACCTGCT GGATCGCAAG
GAAGAAATGG TCGTCAGCAG TGGAATGAAC ATATACCCGA ATGAGGTTGA GAACGTCTTG
ATGGGCCATA CCCAGGTGCT AGAGGCCGTG GTGTTCGGGG TGCCCGACGA AAACTGCGGC
GAAGCTTTGC AAGCAATCTG CGTCCTGCGC CAAGGAGCAA ATACCGATGC AAAGGTCTTG
GCTGAACTGT GCCGCCAGGC TCTAGGCGAA TTTAAAACGC CGCAAAAAAT CGTTCTGCAG
CATGAGCCTT TGCCTCGTAG CGCAGTGGGG AAAATACAGC GCAGGGCCAT TCGAGCAAAC
TGGTGGGGCA ATACGGAGCG TTTTATCCAT GCAGTTTGA
 
Protein sequence
MNVKDTLLQA VKAFGDRPAV CDGERSHSYQ QVWTRACRLA NGLLAWGFEP GTRVAVLEDN 
SIESLDVVVG LAIAGFVRVP LYAGSALAIQ MNIVEHTNCQ ALIVSPAHAD TAREMHRQDP
KLRLLTYGAS YETWLASADD SDPNINVSDE DLFIIRHSGG TTGVPKGVPI SHRTWLYSIY
EWSYSLPPLS PSDVFLQVSP LSHGAGYLLL PTWIAGACTL VRPAFDAADC LQCLTKYRVT
YSFFGPADLN ALTRFASAAA VPPQNWLKAV ITGGSPIAES TIRRLHKCFG QVLYQYYGQV
EAGIISVMPP LNLDEVSLGD SRLQSCGRPR HDVQVCVLDD ACEALPPGQV GEIAIRGHGV
MSGYWKNPQK TATKFNQGWL LTGDLGRIDE QHYLYLLDRK EEMVVSSGMN IYPNEVENVL
MGHTQVLEAV VFGVPDENCG EALQAICVLR QGANTDAKVL AELCRQALGE FKTPQKIVLQ
HEPLPRSAVG KIQRRAIRAN WWGNTERFIH AV